Gene
| Gene Model ID | pfu_aug2.0_156.1_20350 |
|---|---|
| Locus | scaffold156.1 : 347176 ... 374883 : + |
| To GenomeBrowser | scaffold156.1:347176..374883 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_88.1_57956 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20350.t1 | 3 | 1 | NumbF | 6 | 21 | 3.0e-27 | 94.5 | 2.5 | 9400.0 | -3.3 |
| pfu_aug2.0_156.1_20350.t1 | 1 | 1 | PID | 40 | 172 | 1.5e-26 | 93.0 | 1.2e-29 | 4.4e-26 | 91.5 |
| pfu_aug2.0_156.1_20350.t1 | 3 | 2 | NumbF | 192 | 200 | 3.0e-27 | 94.5 | 1.3 | 4900.0 | -2.3 |
| pfu_aug2.0_156.1_20350.t1 | 3 | 3 | NumbF | 226 | 321 | 3.0e-27 | 94.5 | 8.0e-31 | 3.0e-27 | 94.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20350.t1 | gi|676471602|ref|XP_009059226.1| | hypothetical protein LOTGIDRAFT_92735, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20350.t1 | gi|524887937|ref|XP_005100550.1| | PREDICTED: protein numb-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_156.1_20350.t1 | gi|242016418|ref|XP_002428818.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_156.1_20350.t1 | gi|571500512|ref|XP_006560324.1| | PREDICTED: protein numb-like isoform X4 [Apis mellifera] | 0.0 |
| pfu_aug2.0_156.1_20350.t1 | gi|328779522|ref|XP_001123108.2| | PREDICTED: protein numb-like isoform X1 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20350.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20350.t1 atggagagtctcaaaagacgtctcagttttcggaagaagaagaatcacgtaccagaatgttctaaaccccatcaatggca ggaagatgagaagaaagtcagggatggaacctgtagcttccaagtcaggtatttgggttgtatggaggtgtttgagtctc gagggatgcaggtgtgtgaagaagctgttaaaacactgaaatcgcaatgcaaaggaaaataccagcgagccattctgtat gtgtctggggacgctttgagagttgtagatgaaatcagtaagagtatgattgttgaccaaacaatagaaaaggtatcgtt ttgtgcaccagaccgtaaccatgagaaagggtttgcctatatctgtcgtgacggcacgacacgaaggtggatgtgtcacg ggtttctggcagtcaaagagtcctggtctttcaagagcaggaatagaagatctggtgagagactgagccatgcggtcggt tgtgcttttgccatttgtttagagcgtaagcagaagcgagacaaggaatcagcatcgactgtgacggtaacgtacagtca ggaccgtaccaccttcacacgtacgggctcatttcgtcaaacaacccttacagaaaggatcacagaccctcagagtgcta tactggctgagccagtacctgtgaaaaaggtagataacccttttgcactagagcggccacgggccacaccaaacatgctc taccgtcaaggatcattcaggggctttgaaaatctacaaaaagattcatctccatttaaacgtaccacctcactacgatt aagtgacctgccgtcaacattacaaagacaaaatgccgtcacagacacatctcctcaaacatcaaattcagttataacac agccaatccaagagatgtcacccagtaaagagcaagaggactccatagcccagatgtgccagcagctcacaatgggactg tcccagctcagtaccgatgatccgtttgccagctttggcagtccggtacggcaagaatctgctccggcacagaacgtaac ttcttctacattccacggcacaccaacaaaacaacaacatataccccattcacaacaagcttatcccacacctgtatctc gtcctgccccaaactcctccattcaacaacagaccaacccctgggctaacacatcatccaataatagtgtgtctatagac gggtcttcaccatggacaacatcacaagctaccaatcccttcgcagcagctcctcctataggggctgtatctaatggtgt gccttcaggagggtacccccaaccccctcctcgtgctttcccctctcacacacgcagtcattccatagacactggtgaac tgtcgttcagtcacccttggtcgcagcgacaagttaataaaccgacattacttgagatggccaatcagcgtagtgtgcag tttaatggtacagcatggcccagtaactctgccgccccctcagcaggggttagtgtaccgtcaaagccccaagggccggg cgtcgacccgtttgatgtggcatgggcagctaagtccacatctagtggatctccttatacaggttag |
|
Protein
| Protein ID | pfu_aug2.0_156.1_20350.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20350.t1 MESLKRRLSFRKKKNHVPECSKPHQWQEDEKKVRDGTCSFQVRYLGCMEVFESRGMQVCEEAVKTLKSQCKGKYQRAILY VSGDALRVVDEISKSMIVDQTIEKVSFCAPDRNHEKGFAYICRDGTTRRWMCHGFLAVKESWSFKSRNRRSGERLSHAVG CAFAICLERKQKRDKESASTVTVTYSQDRTTFTRTGSFRQTTLTERITDPQSAILAEPVPVKKVDNPFALERPRATPNML YRQGSFRGFENLQKDSSPFKRTTSLRLSDLPSTLQRQNAVTDTSPQTSNSVITQPIQEMSPSKEQEDSIAQMCQQLTMGL SQLSTDDPFASFGSPVRQESAPAQNVTSSTFHGTPTKQQHIPHSQQAYPTPVSRPAPNSSIQQQTNPWANTSSNNSVSID GSSPWTTSQATNPFAAAPPIGAVSNGVPSGGYPQPPPRAFPSHTRSHSIDTGELSFSHPWSQRQVNKPTLLEMANQRSVQ FNGTAWPSNSAAPSAGVSVPSKPQGPGVDPFDVAWAAKSTSSGSPYTG |
|