Gene
| Gene Model ID | pfu_aug2.0_156.1_20352 |
|---|---|
| Locus | scaffold156.1 : 403036 ... 418290 : + |
| To GenomeBrowser | scaffold156.1:403036..418290 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_6810.1_67557 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna polymerase epsilon subunit 2-like | GO:0000082 GO:0000084 GO:0000722 GO:0003677 GO:0003887 GO:0005654 GO:0006270 GO:0006283 GO:0006297 GO:0008622 GO:0032201 GO:0042276 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20352.t1 | 1 | 1 | Dpoe2NT | 3 | 74 | 7.2e-26 | 89.9 | 3.3e-29 | 1.6e-25 | 88.7 |
| pfu_aug2.0_156.1_20352.t1 | 1 | 1 | DNA_pol_E_B | 166 | 367 | 0.0 | 171.5 | 0.0 | 0.0 | 171.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20352.t1 | gi|524943705|ref|XP_005072912.1| | PREDICTED: DNA polymerase epsilon subunit 2 [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_156.1_20352.t1 | gi|676471592|ref|XP_009059224.1| | hypothetical protein LOTGIDRAFT_218232 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20352.t1 | gi|291225848|ref|XP_002732910.1| | PREDICTED: DNA polymerase epsilon subunit 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_156.1_20352.t1 | gi|531997272|ref|XP_005343195.1| | PREDICTED: DNA polymerase epsilon subunit 2 isoform X4 [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_156.1_20352.t1 | gi|426376834|ref|XP_004055187.1| | PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Gorilla gorilla gorilla] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20352.t1 atgactacgaataaattgaaatcgcagattacctctgcctttaaaatgcatggtctctcattaagaagtgaggccagcag ataccttgtagaagtcttgaacttagtgggcattaaacagcaagaaggatgtatagagaaaatgatagaagtcattcaga aacaaccattgacgtcatccctgattgacaagaagacgtgtgaaatagccgtacaggaatgtaatgctgaagaggaggaa ggtgtaatacatatacaagggagtcctgagaatttccacacaggtttattcacagagaactgctttgtgttagcagaggg atggtatgaggacgaggtgttccatgtgaatgcattcggattccctcccccagaacctgcaaggactacaaggtcttatt ttggtaacattaactttttcggtgggctatcaaacgtgtgtgccaaagcgtctgtgaagttaaaacaggtagaacaagag aaccaagatgccatgtttgttatcctatctgatgtttggctggaccaagttaaggttatggagaagttgagagttttatt tactggttactgtgatatgccacctacctgttttattctgtgtggtaactttctatcatcgccccaaggtggtaaacacg ttaaagtgctcaaagattgcttacatacttttactgaattagtactagagtttccctctatagcagagaacagtaggttt ctttttgttcctggtccacaggacccaggccctgccactatattacctaggacaccaattccaaactacgtgacagagga agtgacacgtaaattaccgctagcgacatttaccactaatccatgccgtatacagtactgtacccaggagattgtggtgt tcagagaggacatcgtcacaaagatgtgtcggaactgtgtcaagtttccgtcagacaatgatgtaccatcacactttgcc aagacattagtgagccaaggacatttatgcccgctacctttgcacgtttgtccggtatattggtcgtatgacaatggatt acgactctaccctctacctgatatggtgatttgtgctgacaaatacgatcccttccacactactgccacagactgtatgg tcatgaaccctggctcatttccacggacagacttcagcttcaaagtgtattttccagcgtcgaggaacatggaggacagt aagatagaggactag |
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Protein
| Protein ID | pfu_aug2.0_156.1_20352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20352.t1 MTTNKLKSQITSAFKMHGLSLRSEASRYLVEVLNLVGIKQQEGCIEKMIEVIQKQPLTSSLIDKKTCEIAVQECNAEEEE GVIHIQGSPENFHTGLFTENCFVLAEGWYEDEVFHVNAFGFPPPEPARTTRSYFGNINFFGGLSNVCAKASVKLKQVEQE NQDAMFVILSDVWLDQVKVMEKLRVLFTGYCDMPPTCFILCGNFLSSPQGGKHVKVLKDCLHTFTELVLEFPSIAENSRF LFVPGPQDPGPATILPRTPIPNYVTEEVTRKLPLATFTTNPCRIQYCTQEIVVFREDIVTKMCRNCVKFPSDNDVPSHFA KTLVSQGHLCPLPLHVCPVYWSYDNGLRLYPLPDMVICADKYDPFHTTATDCMVMNPGSFPRTDFSFKVYFPASRNMEDS KIED |
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