Gene
| Gene Model ID | pfu_aug2.0_156.1_20354 |
|---|---|
| Locus | scaffold156.1 : 431573 ... 452145 : - |
| To GenomeBrowser | scaffold156.1:431573..452145 |
| Genes list of scaffold | scaffold156.1 |
| Synonym | pfu_aug1.0_22582.1_54844 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adaptin ear-binding coat-associated protein 1 | GO:0005515 GO:0005905 GO:0006897 GO:0030125 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_156.1_20354.t1 | 2 | 1 | DUF1681 | 27 | 159 | 0.0 | 165.9 | 0.0 | 0.0 | 163.9 |
| pfu_aug2.0_156.1_20354.t1 | 2 | 2 | DUF1681 | 274 | 303 | 0.0 | 165.9 | 0.21 | 1000.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_156.1_20354.t1 | gi|676467851|ref|XP_009058021.1| | hypothetical protein LOTGIDRAFT_228788 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_156.1_20354.t1 | gi|27229051|ref|NP_080543.2| | adaptin ear-binding coat-associated protein 1 [Mus musculus] | 0.0 |
| pfu_aug2.0_156.1_20354.t1 | gi|395538537|ref|XP_003771235.1| | PREDICTED: adaptin ear-binding coat-associated protein 1 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_156.1_20354.t1 | gi|60359884|dbj|BAD90161.1| | mFLJ00061 protein [Mus musculus] | 0.0 |
| pfu_aug2.0_156.1_20354.t1 | gi|532114206|ref|XP_005341772.1| | PREDICTED: adaptin ear-binding coat-associated protein 1 [Ictidomys tridecemlineatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_156.1_20354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20354.t1 atgtactcgagctcggacgccgccatcatagttaatgcaaaatggcgtttatccagtttccgaagtgagccgcgcagaca agctgcagattggaacttagaaaagccagattggacgggcagactgagggtagttgccaagggaagagatctatttataa agttagaggataaaacatcaggagagctgtttgcacaatgtccagtagagagttatccaggggtggcggtggaggctgta atggactctagtagatattttgttatacgactcaaagatgaagggggtcgcagtgcttttataggtattggctttgaaga tagaggggactcatttgatctcaatgtagcattacaggatcacttcaagtggttaaagaatgaagatgatgcaaaaaaag ccacggcagaattgtcaaaaggaccaaagttagatctgggatttaaggaaggccagaccatcaaaataaatatcgcaggg gcaaagaaagagggatccaagcctagaccaaaaccagccagtagtataggtggaatcttacccccaccaccagggggcag ttctaaacttccaccaccaccagggggagctcctttaccatcatttcaagcgccatctagtggcggaaacttacaatcat ttcccgtgcaacaaactgtctcaaataatggtcagaacaatagtaacgttgatctgttgaactttgattttgatacgtcg tcgtcagcttcctcaagtaatagtgcaaatgtaccgctacaagcgtcacagactagtaacgacccctggggagagtttac aggagcaagttatcgttcttaccccatcccgcctctatccgtccaaatagctgtcaaaggcggggaatggggtctgatat ttcggattattactgccagtactcgagcaaagaaagaaggatccaaaccaagaccaaaaccagccagtagtataggtgga atcttacccccaccaccagggggcagttctaaacttccaccaccaccagggggagctcctttaccatcatttcaagcacc atctagtggcggaaacttacaatcatttcccgtgcaacaaactgtctcaaataatggtcagaacaatagtaacgttgatc tgttgaactttgattttgatacgtcgtcgtcagcttcctcaagtaatagtgcaaatgtaccgctacaagcgtcacagact agtaacgacccctggggagagtttacaggagcaagctccagtgataattgggtccaattttaa |
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Protein
| Protein ID | pfu_aug2.0_156.1_20354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_156.1_20354.t1 MYSSSDAAIIVNAKWRLSSFRSEPRRQAADWNLEKPDWTGRLRVVAKGRDLFIKLEDKTSGELFAQCPVESYPGVAVEAV MDSSRYFVIRLKDEGGRSAFIGIGFEDRGDSFDLNVALQDHFKWLKNEDDAKKATAELSKGPKLDLGFKEGQTIKINIAG AKKEGSKPRPKPASSIGGILPPPPGGSSKLPPPPGGAPLPSFQAPSSGGNLQSFPVQQTVSNNGQNNSNVDLLNFDFDTS SSASSSNSANVPLQASQTSNDPWGEFTGASYRSYPIPPLSVQIAVKGGEWGLIFRIITASTRAKKEGSKPRPKPASSIGG ILPPPPGGSSKLPPPPGGAPLPSFQAPSSGGNLQSFPVQQTVSNNGQNNSNVDLLNFDFDTSSSASSSNSANVPLQASQT SNDPWGEFTGASSSDNWVQF |
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