Gene
| Gene Model ID | pfu_aug2.0_1565.1_18404 |
|---|---|
| Locus | scaffold1565.1 : 1 ... 50385 : - |
| To GenomeBrowser | scaffold1565.1:1..50385 |
| Genes list of scaffold | scaffold1565.1 |
| Synonym | pfu_aug1.0_3418.1_08608 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1565.1_18404.t1 | 2 | 1 | IncA | 50 | 145 | 8.3e-07 | 28.7 | 0.00013 | 0.067 | 12.7 |
| pfu_aug2.0_1565.1_18404.t1 | 2 | 2 | IncA | 186 | 292 | 8.3e-07 | 28.7 | 5.1e-07 | 0.00026 | 20.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1565.1_18404.t1 | gi|524871146|ref|XP_005092349.1| | PREDICTED: uncharacterized protein LOC101853915 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1565.1_18404.t1 | gi|676446308|ref|XP_009051037.1| | hypothetical protein LOTGIDRAFT_159143 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1565.1_18404.t1 | gi|585701985|ref|XP_006822984.1| | PREDICTED: uncharacterized protein LOC100375393 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1565.1_18404.t1 | gi|260830983|ref|XP_002610439.1| | hypothetical protein BRAFLDRAFT_124260 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1565.1_18404.t1 | gi|390360380|ref|XP_794876.3| | PREDICTED: uncharacterized protein LOC590170 isoform X4 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1565.1_18404.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1565.1_18404.t1 atgttttctttatttatcaagagttacttctttagtgctgtgtacagtgaagacctaaccactcatactgatggctccat catgaaaattccctacttcacgttaatgagacgaatttttgatgaaagagacgataaacaagatattttgtctgagcaac tagatgaagtaaaaagaagattgtttgagaagcacaagcagttagaagagaatcagcagaaaattttgacgttagacgaa accattgaaggactgaataacagaatagaagaactagatgagagtttgactgagagaaaatcagaaattgtcagacttga agatgaattacgtgaggaaagggaaagatcagaggacatggagcagcgtttggagggtgacattaatgacttacaagata gtctagacgaggcacatgctgaaatagaaaatctatctaaatacaagaaaggatatgatgatttatattacgcttttttg gacacatcagaaggatcagaaactccgagtaaaaagatgagaccagtaatctctactaaacgggcaaatctgatcaacaa cattgaagctgctcaaaaattagaagaacaaatcatgagtgtgatgaacacagctattgaagaatttgataagtttatgg aggatcataaaggagaattaatgaagatagaagagaaagatgacctcactgatgctgaatttgaagttcaggaaatggat attgaacaagcagatcaagagttggaagcagtccaagaaagatttcgaagcaatgttggagacatcactaatgagttaca gcttctaaaccaacatgctacaatgttaaaggaacaactgcaaacactggaacaaaataaaccaacactaaaaagaaaat ccaatccaaagatggcggatccctctggattacagaaatcagattcaatcctgtctgctgggctcaatgaggaagaggag gaagatcctgacatggacccctttataccacaagagcgtgtcttcagtaagtacgctgccatgctgtacacatcaaataa tcagggaaagtcatttgaagagttcaaagacgcaaagttctgcactagttgtggagaaaagactgtgatatgcccccata aattagccagtggagataaggtagtgatcttaccccacaactgttctcatgtcaagatttcacgccctaaagtcagaata aacaaggaacttataga |
|
Protein
| Protein ID | pfu_aug2.0_1565.1_18404.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1565.1_18404.t1 MFSLFIKSYFFSAVYSEDLTTHTDGSIMKIPYFTLMRRIFDERDDKQDILSEQLDEVKRRLFEKHKQLEENQQKILTLDE TIEGLNNRIEELDESLTERKSEIVRLEDELREERERSEDMEQRLEGDINDLQDSLDEAHAEIENLSKYKKGYDDLYYAFL DTSEGSETPSKKMRPVISTKRANLINNIEAAQKLEEQIMSVMNTAIEEFDKFMEDHKGELMKIEEKDDLTDAEFEVQEMD IEQADQELEAVQERFRSNVGDITNELQLLNQHATMLKEQLQTLEQNKPTLKRKSNPKMADPSGLQKSDSILSAGLNEEEE EDPDMDPFIPQERVFSKYAAMLYTSNNQGKSFEEFKDAKFCTSCGEKTVICPHKLASGDKVVILPHNCSHVKISRPKVRI NKELI |
|