Gene
| Gene Model ID | pfu_aug2.0_1565.1_18405 |
|---|---|
| Locus | scaffold1565.1 : 59856 ... 70206 : + |
| To GenomeBrowser | scaffold1565.1:59856..70206 |
| Genes list of scaffold | scaffold1565.1 |
| Synonym | pfu_aug1.0_125248.1_13785 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1565.1_18405.t1 | 2 | 1 | gag-asp_proteas | 363 | 404 | 9.2e-07 | 28.6 | 1.7e-09 | 4.1e-06 | 26.5 |
| pfu_aug2.0_1565.1_18405.t1 | 1 | 1 | Asp_protease_2 | 365 | 439 | 4.0e-07 | 30.4 | 4.8e-10 | 1.2e-06 | 28.9 |
| pfu_aug2.0_1565.1_18405.t1 | 2 | 2 | gag-asp_proteas | 423 | 446 | 9.2e-07 | 28.6 | 1.2 | 3000.0 | -2.0 |
Transcript
| Transcript ID | pfu_aug2.0_1565.1_18405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1565.1_18405.t1 atgtctgctgacgatttacaacgtgaggtgacattgttagaggctgagattcaacttattgaacgtagtaccgtaaatcg ggaaaatggtatgcgccactcgactcctaatactcacttacaaggtaacgggccaggtcatgtctccttagactctggta ttgttacaatgcgcagatcctctgtcccagatgtccgtggtaccaacagtcaaagtaccaggcgcagagttggttttgca aactctgataatattggtcagttatcaagtggtgtcacgtacaggcactatacaaacagacaacaaggtaacgtaggtaa taatacacctactggacaggcaacgagcaatgtacagagaccaactnctagctccctgactaaagactccgaatacggta acaagcaatgtaccaacaccaggagaggggtaaaacctgccacttacgatggtagtggtaactggcttggttacaaatca cattttcagtcggtaagtaaaattaacaggttgactgatgacgacaaggggctttacctcgcagcatcattacggggtca tgctcaagctgtacttggtgatctccctgactccaagaaggatgactacatgtcgttgatcaaagctcttgaagataggt tccttccaccgaatcaaacagaatcagacagagttcaactgcggtcaaggcgtaaacgtgcgacagagaccatcccggaa cttggtcaagctatacgtagacttacaaatttagcttacgcaagtgcaccgtcagaggtaagagaaaccctttctaagga acagtttcttgatgccttaccagactctgacatgcgaattagaattaaacaggctcgtccagaggacctgaatgatacaa taagacatgcagtagagcttggggctttccttagagcagaggataaaactggaagtaaaggctatcagcgtcaggttaca agtgaagcaaacgagtcagacgacatgaaacgtctgattgagaaattgcaaagttctgtggaaactattggtaaggaaat acaacagttaaagacttcaacgtcccaggcaaaaggtagtgctggtatatacgtagaagtccttataaatggggtccctg gtaagtttctagtagatgcaggttcaactgttgcaatcatttctagggaacatttcgaacaactgaacctggtattgcat gagacagatatgaaggtatttactgcagacgaaaaagaaatgccgatagatggtttcacagacgttaccataacacttgg ccagaaacagataaagatacaagcagtagtatctagcattctagcacaaggtatcatcgagtcgtctgtgaagtcactga cacgttctagaccactaactgccagagtactagtggcaacggatgatacgggaataataccggtgagacttctcaatctc gaagatacatctaaggtagtatacaaagatacagatatagggcaattggaaagtgctgaaaaagtacaggtgccccagtg ccaaggtgaaatcttagatgaagagctaaagaaattggcaaatcgtaccacaatgccaaagatcaaaactactactaaca aaggatacaagtgtcccttttgccctgtgaggacttacaaccaagaatgttgtaagaagcttgtgtatcgtgacatatgt ggcttcggctgtcgttcttccacaaatctgaaacatgaggcaccgacacagcagccgacacagactgactctaacaataa tgactgtgagagtcattcagagacagaaccctctgttagcaaggacctggagttaagcagtgataatgatgaagatacgt cgcaggttcacgcgagtccaagtgcttcaacctccaagtcagatgacatatacgtgggcagactttttagaaagccaacc aggcctgttctcttcacatcaccagcaagaccaacagatagttgtatcacagatgatgaaccgcatacagtagaggtgca cgagcagttggtcgagcttagggaccagggtacccagactgatcatatgtattacactgagagtgttaagataataacta catggatagaggagggcggaaagaaaacggtattagatgttactttgaccttaggccaagatgatgtgaaacctttgagt catgggcaacatcatactaaaacatga |
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Protein
| Protein ID | pfu_aug2.0_1565.1_18405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1565.1_18405.t1 MSADDLQREVTLLEAEIQLIERSTVNRENGMRHSTPNTHLQGNGPGHVSLDSGIVTMRRSSVPDVRGTNSQSTRRRVGFA NSDNIGQLSSGVTYRHYTNRQQGNVGNNTPTGQATSNVQRPTXSSLTKDSEYGNKQCTNTRRGVKPATYDGSGNWLGYKS HFQSVSKINRLTDDDKGLYLAASLRGHAQAVLGDLPDSKKDDYMSLIKALEDRFLPPNQTESDRVQLRSRRKRATETIPE LGQAIRRLTNLAYASAPSEVRETLSKEQFLDALPDSDMRIRIKQARPEDLNDTIRHAVELGAFLRAEDKTGSKGYQRQVT SEANESDDMKRLIEKLQSSVETIGKEIQQLKTSTSQAKGSAGIYVEVLINGVPGKFLVDAGSTVAIISREHFEQLNLVLH ETDMKVFTADEKEMPIDGFTDVTITLGQKQIKIQAVVSSILAQGIIESSVKSLTRSRPLTARVLVATDDTGIIPVRLLNL EDTSKVVYKDTDIGQLESAEKVQVPQCQGEILDEELKKLANRTTMPKIKTTTNKGYKCPFCPVRTYNQECCKKLVYRDIC GFGCRSSTNLKHEAPTQQPTQTDSNNNDCESHSETEPSVSKDLELSSDNDEDTSQVHASPSASTSKSDDIYVGRLFRKPT RPVLFTSPARPTDSCITDDEPHTVEVHEQLVELRDQGTQTDHMYYTESVKIITTWIEEGGKKTVLDVTLTLGQDDVKPLS HGQHHTKT |
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