Gene
| Gene Model ID | pfu_aug2.0_1565.1_18409 |
|---|---|
| Locus | scaffold1565.1 : 121436 ... 135864 : + |
| To GenomeBrowser | scaffold1565.1:121436..135864 |
| Genes list of scaffold | scaffold1565.1 |
| Synonym | pfu_aug1.0_4120.1_01628 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| master replication initiator protein | GO:0017111 GO:0043170 GO:0044237 GO:0044238 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1565.1_18409.t2 | 1 | 1 | RNA_helicase | 259 | 338 | 4.5e-06 | 26.7 | 1.3e-09 | 9.4e-06 | 25.7 |
Transcript
| Transcript ID | pfu_aug2.0_1565.1_18409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1565.1_18409.t1 atgtatgtatatgtaggagatgcgagatatgatagtgtagatgtctaccagttagcgagggggagagcccttgtaagggc tacaagccaagcttctaaccacactcaccctcctactggtcaacagaagaaggcaaagaaaaaagacggcaaaggaaaga acttcatgctgactttccaatccacttgcaagtacgaactccaacggtacttccagaataagggtggagagacgtggatg agagcgttagctgccggtaatgagtggggaagcggattcaacgagctaggccatacccatgccgtaatccagaccaaaac agagatgacgttcaaggaatttaggctgaaatggaagggtccaaatataggggacatccagagatgccaaaatgtgaagg attctgtgcgttacgtcaccaaagaggatccacggagcttatgtttccattttgataaagactggacaagcttgctagtg aaggcctacatttatgcacagaagagctccaaattggttccaacatcctatccgtactgctccctgccgcctttccagca aaggcaattccgtgatatgtggactcagttccgggcagaggagcaggacgctaggcaatgttggaccaatgaggagctcg aactgcgaccatggcaacggcaggtcagacgtcagatactgcaacaagacgataggacggtactgtggatacatgacgag gtgggaggccatggcaagagcacacttgcaaagtatatgatgggcgaaggagcaatgtacgccaccaacagctcgacagt gaatttcgcctatgcctacaacgaggagaaggtggttatatttgactttgtgcgtgacgacagagaccatattaactacg ggattctagaatgcctcaagaatggtatgatgttctctgccaaatatgaaagtagggtaaagaggttcacaccagccaag gttgcagtttttgccaatttcgcccctgactacgagaagttgtcagcagacagatgattaaataaaaggcaaagaaaggt cgaaagtcaaggtcaaactaagaataaacatcctgtggatatgacatcttatttggatttgagtattattgccctgatgg ataccattgttgtagcgaaacaaccaggacttgctgtccctctgccaccatttgtaccaatggagacactgcatgtctca cgattgggtcgtcagccaaatcaaggaacagtgatgcagcctagcgccccgatgcaacctcatgtcaccaaccaaaatcc aggaagtcaacagtttatttattctgttagtcagccggaccaagtcagcaatatttctcctggaactttaaaccaaggct tttctaaataa |
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| Transcript ID | pfu_aug2.0_1565.1_18409.t2 |
| Definition | - |
>pfu_aug2.0_1565.1_18409.t2 atgttaactttcctatcctcgagcgcgttgaggttgaggactctgacgtcattttatatgacgtcatttggactcagtgg cctcagggcctcacttctcactagcggcgcctacaaccagttagcgagggggagagcccttgtaagggctacaagccaag cttctaaccacactcaccctcctactggtcaacagaagaaggcaaagaaaaaagacggcaaaggaaagaacttcatgctg actttccaatccacttgcaagtacgaactccaacggtacttccagaataagggtggagagacgtggatgagagcgttagc tgccggtaatgagtggggaagcggattcaacgagctaggccatacccatgccgtaatccagaccaaaacagagatgacgt tcaaggaatttaggctgaaatggaagggtccaaatataggggacatccagagatgccaaaatgtgaaggattctgtgcgt tacgtcaccaaagaggatccacggagcttatgtttccattttgataaagactggacaagcttgctagtgaaggcctacat ttatgcacagaagagctccaaattggttccaacatcctatccgtactgctccctgccgcctttccagcaaaggcaattcc gtgatatgtggactcagttccgggcagaggagcaggacgctaggcaatgttggaccaatgaggagctcgaactgcgacca tggcaacggcaggtcagacgtcagatactgcaacaagacgataggacggtactgtggatacatgacgaggtgggaggcca tggcaagagcacacttgcaaagtatatgatgggcgaaggagcaatgtacgccaccaacagctcgacagtgaatttcgcct atgcctacaacgaggagaaggtggttatatttgactttgtgcgtgacgacagagaccatattaactacgggattctagaa tgcctcaagaatggtatgatgttctctgccaaatatgaaagtagggtaaagaggttcacaccagccaaggttgcagtttt tgccaatttcgcccctgactacgagaagttgtcagcagacagatgattaaataaaaggcaaagaaaggtcgaaagtcaag gtcaaactaagaataaacatcctgtggatatgacatcttatttggatttgagtattattgccctgatggataccattgtt gtagcgaaacaaccaggacttgctgtccctctgccaccatttgtaccaatggagacactgcatgtctcacgattgggtcg tcagccaaatcaaggaacagtgatgcagcctagcgccccgatgcaacctcatgtcaccaaccaaaatccaggaagtcaac agtttatttattctgttagtcagccggaccaagtcagcaatatttctcctggaactttaaaccaaggcttttctaaataa |
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Protein
| Protein ID | pfu_aug2.0_1565.1_18409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1565.1_18409.t1 MYVYVGDARYDSVDVYQLARGRALVRATSQASNHTHPPTGQQKKAKKKDGKGKNFMLTFQSTCKYELQRYFQNKGGETWM RALAAGNEWGSGFNELGHTHAVIQTKTEMTFKEFRLKWKGPNIGDIQRCQNVKDSVRYVTKEDPRSLCFHFDKDWTSLLV KAYIYAQKSSKLVPTSYPYCSLPPFQQRQFRDMWTQFRAEEQDARQCWTNEELELRPWQRQVRRQILQQDDRTVLWIHDE VGGHGKSTLAKYMMGEGAMYATNSSTVNFAYAYNEEKVVIFDFVRDDRDHINYGILECLKNGMMFSAKYESRVKRFTPAK VAVFANFAPDYEKLSADRXLNKRQRKVESQGQTKNKHPVDMTSYLDLSIIALMDTIVVAKQPGLAVPLPPFVPMETLHVS RLGRQPNQGTVMQPSAPMQPHVTNQNPGSQQFIYSVSQPDQVSNISPGTLNQGFSK |
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| Protein ID | pfu_aug2.0_1565.1_18409.t2 |
| Definition | - |
>pfu_aug2.0_1565.1_18409.t2 MLTFLSSSALRLRTLTSFYMTSFGLSGLRASLLTSGAYNQLARGRALVRATSQASNHTHPPTGQQKKAKKKDGKGKNFML TFQSTCKYELQRYFQNKGGETWMRALAAGNEWGSGFNELGHTHAVIQTKTEMTFKEFRLKWKGPNIGDIQRCQNVKDSVR YVTKEDPRSLCFHFDKDWTSLLVKAYIYAQKSSKLVPTSYPYCSLPPFQQRQFRDMWTQFRAEEQDARQCWTNEELELRP WQRQVRRQILQQDDRTVLWIHDEVGGHGKSTLAKYMMGEGAMYATNSSTVNFAYAYNEEKVVIFDFVRDDRDHINYGILE CLKNGMMFSAKYESRVKRFTPAKVAVFANFAPDYEKLSADRXLNKRQRKVESQGQTKNKHPVDMTSYLDLSIIALMDTIV VAKQPGLAVPLPPFVPMETLHVSRLGRQPNQGTVMQPSAPMQPHVTNQNPGSQQFIYSVSQPDQVSNISPGTLNQGFSK |
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