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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_15678.1_29837
Locus scaffold15678.1 : 324 ... 2256 : -
To GenomeBrowser scaffold15678.1:324..2256
Genes list of scaffold scaffold15678.1
Synonym pfu_aug1.0_16936.1_54359

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_15678.1_29837.t1 gi|156359988|ref|XP_001625044.1| predicted protein [Nematostella vectensis] 6.0e-30
pfu_aug2.0_15678.1_29837.t1 gi|543736842|ref|XP_005509363.1| PREDICTED: COPII coat assembly protein SEC16-like [Columba livia] 3.0e-28
pfu_aug2.0_15678.1_29837.t1 gi|260807735|ref|XP_002598664.1| hypothetical protein BRAFLDRAFT_67065 [Branchiostoma floridae] 2.0e-24
pfu_aug2.0_15678.1_29837.t1 gi|555966833|ref|XP_005895466.1| PREDICTED: circumsporozoite protein-like [Bos mutus] 4.0e-24

Transcript
Transcript IDpfu_aug2.0_15678.1_29837.t1
Definition-
>pfu_aug2.0_15678.1_29837.t1
tgtgccaagacatgatgtagtagtgtgtcaagacaatgatgtgatagtgtgtcagggctatgatgtgatagtgtgccatg
acaatgatgtaatagagtgctatgacaatgatgtgatagtgtgctatgactatgatataatagtgtgccatgatgatgtg
atagtgtgccaagacaatgatgtgatagtgtgccaagacaatgatgatatgatagtgtgccatgacaatgatgatgtgat
agtgtgccatgacaatgatatgatagtgtgccaagacaatgatgtgaaaatgtgccatgacaatgatgtgatagtgtgcc
aagacagtgatgtgatagtgtgccatgacaatgtgtgccatgacaatgatgtgatagtgtgccaagacaatgatgtgata
gtgtgccaagacaatgatgtgatagtgtgctatgacaatgatgtgatagtgtgccatgacaatgatgtgatagtgtgcta
tgacaatgatctgatagtgtgccatgacaatgatgtaatagtgtgccatgaacatgtgtgccatgacaatgatgtgatag
tgtaccatgacaatgatgtgatagtgtgccatgaacatgtgagtgtgcatgacaatgatgtgatagtgtgccatgacaat
gatgtgatagtgtgccatgacaatgatgtgatagtgttctatgacaatgatgtgatagtgtgccatgacaatgatgtgat
agtgtgccatgacaatgatgtgatagtgtgccatgacaatgatgtgatagtgtgccattacaatgatgtgatggcatcat
tgtcaaggtgtactatcacatcattgtcatggcacactttggcatcttaa

Protein
Protein IDpfu_aug2.0_15678.1_29837.t1
Definition-
>pfu_aug2.0_15678.1_29837.t1
VPRHDVVVCQDNDVIVCQGYDVIVCHDNDVIECYDNDVIVCYDYDIIVCHDDVIVCQDNDVIVCQDNDDMIVCHDNDDVI
VCHDNDMIVCQDNDVKMCHDNDVIVCQDSDVIVCHDNVCHDNDVIVCQDNDVIVCQDNDVIVCYDNDVIVCHDNDVIVCY
DNDLIVCHDNDVIVCHEHVCHDNDVIVYHDNDVIVCHEHVSVHDNDVIVCHDNDVIVCHDNDVIVFYDNDVIVCHDNDVI
VCHDNDVIVCHDNDVIVCHYNDVMASLSRCTITSLSWHTLAS

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