Gene
| Gene Model ID | pfu_aug2.0_1574.1_15121 |
|---|---|
| Locus | scaffold1574.1 : 91915 ... 104835 : - |
| To GenomeBrowser | scaffold1574.1:91915..104835 |
| Genes list of scaffold | scaffold1574.1 |
| Synonym | pfu_aug1.0_4303.1_16341 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein kinase transmembrane receptor ror2 | GO:0016772 GO:0043167 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1574.1_15121.t1 | 5 | 1 | Lectin_C | 36 | 69 | 1.4e-13 | 51.3 | 0.0012 | 4.5 | 7.9 |
| pfu_aug2.0_1574.1_15121.t1 | 5 | 2 | Lectin_C | 102 | 111 | 1.4e-13 | 51.3 | 4.0 | 15000.0 | -3.9 |
| pfu_aug2.0_1574.1_15121.t1 | 5 | 3 | Lectin_C | 130 | 223 | 1.4e-13 | 51.3 | 3.7e-17 | 1.4e-13 | 51.3 |
| pfu_aug2.0_1574.1_15121.t1 | 2 | 1 | Kringle | 208 | 218 | 1.4e-11 | 44.2 | 2.8 | 10000.0 | -3.4 |
| pfu_aug2.0_1574.1_15121.t1 | 2 | 2 | Kringle | 258 | 326 | 1.4e-11 | 44.2 | 3.9e-15 | 1.4e-11 | 44.2 |
| pfu_aug2.0_1574.1_15121.t1 | 5 | 4 | Lectin_C | 278 | 318 | 1.4e-13 | 51.3 | 0.51 | 1900.0 | -0.5 |
| pfu_aug2.0_1574.1_15121.t1 | 5 | 5 | Lectin_C | 404 | 423 | 1.4e-13 | 51.3 | 2.9 | 11000.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1574.1_15121.t1 | gi|195380045|ref|XP_002048781.1| | GJ21235 [Drosophila virilis] | 4.0e-16 |
| pfu_aug2.0_1574.1_15121.t1 | gi|195149640|ref|XP_002015764.1| | GL11237 [Drosophila persimilis] | 7.0e-16 |
| pfu_aug2.0_1574.1_15121.t1 | gi|198456426|ref|XP_001360317.2| | GA17849 [Drosophila pseudoobscura pseudoobscura] | 8.0e-16 |
| pfu_aug2.0_1574.1_15121.t1 | gi|195120033|ref|XP_002004533.1| | GI19986 [Drosophila mojavensis] | 1.0e-15 |
| pfu_aug2.0_1574.1_15121.t1 | gi|195027928|ref|XP_001986834.1| | GH20314 [Drosophila grimshawi] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_1574.1_15121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1574.1_15121.t1 atgcatcagattttgatttgtacaaaaagaaaatgttttgaaagggagcagaaaaatcaaatttcctcacgattaaaatc tgacgtgcaatattactggattttagatggtacggattgcaaagccatacaaaagcctcgctctgcttttggaaagaatt acatttcatcgcggaactgtacggagaaacacggctttatttgttcacgagtacttcctctctcttcgttaatacaactt agaacaccgcaaaacttacgagctaccaccgcacctacaatttcatctacatcagacctgtcatcaaataaaacctcaga caattcttgtggtgagggatggatcatttatggaaagaaatgttttaaaaaactatttcacccttggtcatggacaactg gacggagccattgttttacaatatttgcagatcttgccagcatccatagcaaagaagaaaacactttcatcgtaaaaact ttctctgtcaacaactttttatggattggtctcagaggttcaggatcatcatggacggatggttccagcgttaattttac ttctctctctatgactccaacaagcaatacgacggcttgtgttgccgtatcaggtgatgggacatggactcagagaccat gtacaaagtggtatccagtactgtgtatgaggagaatcaaaggtaatcattttgnatcccgtataatccgctgtcagagt aattttacatggacaattccaatgttcaagtgctatcgaaattgttacataaaaggtcagccttatttcgggggatacaa tataacagaatctggtaaaccgtgtcagagatgggacgcacggactcccaacaaacatggctacaagtcctggcctaacg ctatagataattactgtaggatgtacgaacattcagaaccttggtgttacactatcagtaaggactcacgatgggagaac tgtaacgttcccctatgtcctacaaacacagataaaattactgcagctgcacgtttacaaggaacgccaacaggacaggg tattcaacaacaaagacgttctgttccatccgctattatattcttgattgttggtatggtaataactctggtttgcctga ctttcctcgtaattgctgtcataatattgtggaggaggaaaaccgtgggaaggaaatacagcgatggaataaagtttgaa aacgccatgtacgtgcgtcataccgatgaaacctcgtcacagcaagaaagtagtggcagctgtaaatacgtcagtgattg a |
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Protein
| Protein ID | pfu_aug2.0_1574.1_15121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1574.1_15121.t1 MHQILICTKRKCFEREQKNQISSRLKSDVQYYWILDGTDCKAIQKPRSAFGKNYISSRNCTEKHGFICSRVLPLSSLIQL RTPQNLRATTAPTISSTSDLSSNKTSDNSCGEGWIIYGKKCFKKLFHPWSWTTGRSHCFTIFADLASIHSKEENTFIVKT FSVNNFLWIGLRGSGSSWTDGSSVNFTSLSMTPTSNTTACVAVSGDGTWTQRPCTKWYPVLCMRRIKGNHFXSRIIRCQS NFTWTIPMFKCYRNCYIKGQPYFGGYNITESGKPCQRWDARTPNKHGYKSWPNAIDNYCRMYEHSEPWCYTISKDSRWEN CNVPLCPTNTDKITAAARLQGTPTGQGIQQQRRSVPSAIIFLIVGMVITLVCLTFLVIAVIILWRRKTVGRKYSDGIKFE NAMYVRHTDETSSQQESSGSCKYVSD |
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