Gene
| Gene Model ID | pfu_aug2.0_1574.1_15122 |
|---|---|
| Locus | scaffold1574.1 : 108106 ... 109421 : + |
| To GenomeBrowser | scaffold1574.1:108106..109421 |
| Genes list of scaffold | scaffold1574.1 |
| Synonym | pfu_aug1.0_91850.1_71387 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pancreas transcription factor 1 subunit alpha | GO:0003407 GO:0003677 GO:0006355 GO:0007420 GO:0009887 GO:0048699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1574.1_15122.t1 | 2 | 1 | HLH | 33 | 46 | 6.7e-14 | 51.3 | 0.42 | 6200.0 | -3.0 |
| pfu_aug2.0_1574.1_15122.t1 | 2 | 2 | HLH | 60 | 113 | 6.7e-14 | 51.3 | 4.5e-18 | 6.7e-14 | 51.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1574.1_15122.t1 | gi|530626698|ref|XP_005302876.1| | PREDICTED: pancreas transcription factor 1 subunit alpha [Chrysemys picta bellii] | 2.0e-09 |
| pfu_aug2.0_1574.1_15122.t1 | gi|291237759|ref|XP_002738800.1| | PREDICTED: protein dimmed-like [Saccoglossus kowalevskii] | 4.0e-09 |
| pfu_aug2.0_1574.1_15122.t1 | gi|224044786|ref|XP_002190229.1| | PREDICTED: pancreas transcription factor 1 subunit alpha [Taeniopygia guttata] | 5.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_1574.1_15122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1574.1_15122.t1 atgtcggtggaaaaagtagatattgagaccaaaattgctgataaggaactatcagatgtagaacctgttgatttgactaa tgaatcaaatgaaattaggaaaaagactaatgataaaaagaagaaaagagtaaagaaattcgaaagtttgaatataagtg aagaagaaatcgaagaaaggagacggtcagcaaatgatcttgaaaggaggaggatgaaaaaaatgtcggaagccctagac gatctcagaaagtgtattcctcaacatcttcatctgtatcatcgtagaatgtctaaaattcggactttgcgacttgcgac gtcgtacatacgggcacttagtgaaatgttacagaaggacattatgagagaaatggtacagaatgcgtatagaaatattc agtacaatttggtccagtcaccagtggtgtatcccggaataacggtcaatgtggcgccttcccccaccaccggaactcct aacttaggacattcctaccacactccccctaggagacagctgaatttctctcagggacagggttattccccctctacaca gtacctcccgacaccagatcagaccctaggaggaccacacccagcataccaaacacccatcccgcccagtatagcgttct accgtacctccgctcagagacgctggcacacacctagccacaccctttcctcgccgcctgaggaggatgagtaccccagt aagccttaccaggacccgtcagtaccggtacagggagatgggaggataccagatcaggagttctcggggaaaagttcctg tcgatatgggactatgtatgtagaaggggtctacccactccccgacagtaaaccaaaggatggataa |
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Protein
| Protein ID | pfu_aug2.0_1574.1_15122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1574.1_15122.t1 MSVEKVDIETKIADKELSDVEPVDLTNESNEIRKKTNDKKKKRVKKFESLNISEEEIEERRRSANDLERRRMKKMSEALD DLRKCIPQHLHLYHRRMSKIRTLRLATSYIRALSEMLQKDIMREMVQNAYRNIQYNLVQSPVVYPGITVNVAPSPTTGTP NLGHSYHTPPRRQLNFSQGQGYSPSTQYLPTPDQTLGGPHPAYQTPIPPSIAFYRTSAQRRWHTPSHTLSSPPEEDEYPS KPYQDPSVPVQGDGRIPDQEFSGKSSCRYGTMYVEGVYPLPDSKPKDG |
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