Gene
| Gene Model ID | pfu_aug2.0_1575.1_18411 |
|---|---|
| Locus | scaffold1575.1 : 1382 ... 8285 : - |
| To GenomeBrowser | scaffold1575.1:1382..8285 |
| Genes list of scaffold | scaffold1575.1 |
| Synonym | pfu_aug1.0_61733.1_20311 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1575.1_18411.t1 | 1 | 1 | DUF1768 | 302 | 445 | 4.59626e-43 | 146.6 | 0.0 | 1.10002e-42 | 145.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1575.1_18411.t1 | gi|676482385|ref|XP_009062681.1| | hypothetical protein LOTGIDRAFT_220498 [Lottia gigantea] | 4.06377e-44 |
| pfu_aug2.0_1575.1_18411.t1 | gi|72168255|ref|XP_793312.1| | PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic [Strongylocentrotus purpuratus] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug2.0_1575.1_18411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1575.1_18411.t1 atggatcatgcaaaaaatcatttagatgatgagagttctgggagtaaaagaaagtggcgtgatcgcagtgagtcatatac tagtgagagcaaaaagaagaaaaggtcctcctcttcctcacggtctgtagaaaagtctcaacatacactgcacaaatata tgcaatcaacggataatacagatgagagaagtaattccagatcgcatgaacatgatgaagacccctcatcacacaaaaaa tccaaatcacatggaaaatccccttcacatggaaaatcctcttcacatggaaaatcctcttcacatggaaaatcttcaca cagaaaatcctcttcacatggggaatcctcaccacatggagaatcctcatcacatggaacatcatcctcgcatggaaaat cctcttcacattcacatggaaaatcctcttcacatggaaaattctcttcacatggaaaatcctcttcacatggaaaatcc tcttcacatggaaaatcttcacacagagaatcctcttcacatggggaatcctcaccacatggagaatcctcatcacatgg aacatcatcctcgcatggaaaatcctcttcacattcacatggaaaatcctcttcacatggaaaaatctcttcaaacaaac cattcacattgccacaggataagtatcatgaaaaagatgaaaacgatgatttttcatcacaaggacaatcctcattacat gggtatccttcatcaaacaaagaatcaggcgtaaagaaatcacctcacaaaaatgtaaagaaaagtccggaacaactttt agaagaatatgggcatttccttcataaaaaacaaagggatgacaaataccagaaaattctacaacagcactgggcacaag acactgctagtgactttgagtttttctttggaagcaatggtccatttagccaacactttatatgttattttgaggtggat ggaaaaaacttctgctgtgctgagcagtacatgatgtatatgaaagcagtggtattttatgatgcattccatgctgataa gatcctgaaggcgtcggaccctcgagctatgaagaaactaggtcgtcaagtccagaactttgatcccaaggtgtggggaa gagagtcagtggaaattgttaaaaagggaaacaaatgcaagttttatcagaatgagggattgaaggcggtactgtattcc acctttcctagaatcatggtagaggccagtcccagggacagagtgtgggggataggactcgggcgtgacagaccccaagc atggagtcgtgctacgtggaagggcaccaacaagcttggtcaaatactcaccgaagaactgattcaaagtatcaatctgt ga |
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Protein
| Protein ID | pfu_aug2.0_1575.1_18411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1575.1_18411.t1 MDHAKNHLDDESSGSKRKWRDRSESYTSESKKKKRSSSSSRSVEKSQHTLHKYMQSTDNTDERSNSRSHEHDEDPSSHKK SKSHGKSPSHGKSSSHGKSSSHGKSSHRKSSSHGESSPHGESSSHGTSSSHGKSSSHSHGKSSSHGKFSSHGKSSSHGKS SSHGKSSHRESSSHGESSPHGESSSHGTSSSHGKSSSHSHGKSSSHGKISSNKPFTLPQDKYHEKDENDDFSSQGQSSLH GYPSSNKESGVKKSPHKNVKKSPEQLLEEYGHFLHKKQRDDKYQKILQQHWAQDTASDFEFFFGSNGPFSQHFICYFEVD GKNFCCAEQYMMYMKAVVFYDAFHADKILKASDPRAMKKLGRQVQNFDPKVWGRESVEIVKKGNKCKFYQNEGLKAVLYS TFPRIMVEASPRDRVWGIGLGRDRPQAWSRATWKGTNKLGQILTEELIQSINL |
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