Gene
| Gene Model ID | pfu_aug2.0_1575.1_18412 |
|---|---|
| Locus | scaffold1575.1 : 17936 ... 27102 : + |
| To GenomeBrowser | scaffold1575.1:17936..27102 |
| Genes list of scaffold | scaffold1575.1 |
| Synonym | pfu_aug1.0_25693.1_40584 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1575.1_18412.t1 | 1 | 1 | DUF1768 | 227 | 340 | 2.7e-31 | 108.4 | 4.1e-35 | 6.0e-31 | 107.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1575.1_18412.t1 | gi|340386320|ref|XP_003391656.1| | PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like, partial [Amphimedon queenslandica] | 1.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_1575.1_18412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1575.1_18412.t1 atggtgagagtagcatttctcaggatggtaatgactggcatgatcactctggtggtaggggaaagggcaaaagacaagga ggaaattatggtggggatggtgacagaaacaggcagggagctgaaagtcagaactggaggtcagagggcaataggtcaca acaaggtcacagagataactggcaagatggcagaggtcaaggaaaaagaggaaagaaagggagaggcggaaacagggaca gagaagatcaccaacagggagataggagacaaggccaggagcagcaccaggagaggagaggacaggagcagcgccaggag aggagaggacaggagcagcaccaggagaggagaggacaggagcagcgccaggagaggagaggacaggagcnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnagcaccaggatcagtttcaggagaggagagggaagccaaggcacaacaaggatccagctttg gagaagattcaacgggaacaggaccatcgaggatatttttaatgggagaccatgacagtgcagagtatatccttagtctt catgagccccgcaagcagaaagaggctggcagaaatgtgtatccatggaaacaagatttatgggatagacactgctatga tattgtaaaaaagggtaattatgccaagttttcacaaaatgaagaattgagagatgctttacttgagacacaccccaaaa ccctggtggagacaaatccattcgataagatatggggcatagggttgaccatggatgacccaaatgcaaaatttcaggcc agttggaagggacgcaactatttaggttttattctaacggaggtcagagaccagctgatgtcagaaggttacaaagttca aggaaaatcttccaagaggatcccaggaatgccagagccagccaagcatgaaaagaaagcagcaatccccggaggtcaag gcccaccaacagctctaccccctacaaacggcaaggattggtttgatgaggagagtactagtagcactcctgcccatggg gtctccgatgtaccaagccctatacccaagatgacaaagtgcttcatctctatcataactacaagttcagataaggacag tagcctcctgcagttgtctgtcctgtcaccagcggggagacagaattggtatgttaagccttccaaacctgtatcaaaac aagtggaggaagtcactggtataaagtatgacaaaggtggtcaaatgtacgtcagcgggagaaaagtggaggccttacca cctaaacaggtcctgcagggcctattggatttcttgggggaggaaccggcttatctggttggtcacaatattaaaagtca cagctgctatgtggttatagaggcagccacacctgctggacttaacgaaaggatggagcgacatctgacacacatggtgg acctggtcactcttgcacgacatcataatagagaactgaaagctcagttaaccctggaggaactatccgagacgatcata ggaagggacataatcagtaataatgctgatgaagatgttgcagctctgaaaaaaatatttgaggaacttaatccgagtga agagacaatgaaagagtgtatgtttgattacaagtatgtcatgaatgccaaacgaatgaacgaagaaaagtcaaagaatc ttgagagctggaagccacttattagtaaaggtgcaatcccaaagaaattagcagaaaaagcagcaaggaatggtgtaaat gcagaggacctacttaaagcatacaaagaaggtggtgaagaaaaattagggtcggttatgtctgagaaagacgataaaaa cgaaccaaaagtatctgacaaaaaaggaaacattcatcagctcagctgttattttaagaagaacatgaaagatgctaact gcaaacatgataaggatgatggatctatacaacattataagatactttacctgccaggtgttaataaccagggtaggtaa |
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Protein
| Protein ID | pfu_aug2.0_1575.1_18412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1575.1_18412.t1 MVRVAFLRMVMTGMITLVVGERAKDKEEIMVGMVTETGRELKVRTGGQRAIGHNKVTEITGKMAEVKEKEERKGEAETGT EKITNREIGDKARSSTRRGEDRSSARRGEDRSSTRRGEDRSSARRGEDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGSVSGEEREAKAQQGSSFGEDSTGTGPSRIFLMGDHDSAEYILSL HEPRKQKEAGRNVYPWKQDLWDRHCYDIVKKGNYAKFSQNEELRDALLETHPKTLVETNPFDKIWGIGLTMDDPNAKFQA SWKGRNYLGFILTEVRDQLMSEGYKVQGKSSKRIPGMPEPAKHEKKAAIPGGQGPPTALPPTNGKDWFDEESTSSTPAHG VSDVPSPIPKMTKCFISIITTSSDKDSSLLQLSVLSPAGRQNWYVKPSKPVSKQVEEVTGIKYDKGGQMYVSGRKVEALP PKQVLQGLLDFLGEEPAYLVGHNIKSHSCYVVIEAATPAGLNERMERHLTHMVDLVTLARHHNRELKAQLTLEELSETII GRDIISNNADEDVAALKKIFEELNPSEETMKECMFDYKYVMNAKRMNEEKSKNLESWKPLISKGAIPKKLAEKAARNGVN AEDLLKAYKEGGEEKLGSVMSEKDDKNEPKVSDKKGNIHQLSCYFKKNMKDANCKHDKDDGSIQHYKILYLPGVNNQGR |
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