Gene
| Gene Model ID | pfu_aug2.0_1575.1_18418 |
|---|---|
| Locus | scaffold1575.1 : 107646 ... 109360 : + |
| To GenomeBrowser | scaffold1575.1:107646..109360 |
| Genes list of scaffold | scaffold1575.1 |
| Synonym | pfu_aug1.0_826.1_29438 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1575.1_18418.t1 | 2 | 1 | Gly_transf_sug | 116 | 125 | 1.1e-07 | 32.1 | 0.59 | 4300.0 | -1.9 |
| pfu_aug2.0_1575.1_18418.t1 | 2 | 2 | Gly_transf_sug | 293 | 360 | 1.1e-07 | 32.1 | 9.7e-11 | 7.2e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1575.1_18418.t1 | gi|260830709|ref|XP_002610303.1| | hypothetical protein BRAFLDRAFT_93039 [Branchiostoma floridae] | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_1575.1_18418.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1575.1_18418.t1 atgtttattttggtaatatctcttaccaaatacagcagcaacaaccaaaacgatgtgaataaagtagataatgatcagag caatttgtcgacgtcatacataccaaacacagtgcattacgtctggtgccataatcacacttttcgattcgaacacttcc taagtgtgctgagtacctggaaggtcctgaaacctacagaaatcatcattcacacaatacacaacatagggactgatgat acggaaataggatggtttgataccttgatgagtcgcgttccggtgatcaaaatacagaaaattccccagaatgtgagcga gtgttgtggtgttccatacggagtttaccttctggagaaaaatgggggtattttcgtctcagagaacactttgattatcg aaaacattgtcccgagtgtcaaagagaattttacgataggcttgacactgtatggggagaatgtgagttatttagttgca accaaaggagatatgcatctacaggaagttgcctttctggacatgcattcaaatctggcacagcgtgttttcgaaaatcc agtttactgcagcaaaagtaataaaacaaagatttttaatttagtagatcaaactaattgtatcgaaatgaaatatctag atccagttgtgacagtgcggtcaaatacaacattaggtgccattgtacggaatttgttgtatgacaccacagaacaagtg ctcgctcggtcactccttccgggcgaaataccaaaattagtccattttgtatggtttgatgacaaaaatttgacatttat gatgtaccttagtatacgaagtgttttgacagttttaaatccggacaaagtatttattcatagtgattcaaagcttgctg gtgattactccgaaaaaataataaaagatccgagagtagaatttttacaccgcgaaataccagaatttatatttggaaga aagttggattttatcgagcataagactgatgtggtgaaattgaatatactacttgaatatggaggaatctacttagattg gaatatagtatctgttcaatcaattgatgatatcatagcaaccggatatgacgcaatcatgaacatcggaaataacacaa gggaaataaacaacggcgttgtgatggcaaaaccggattcgcatttcttgaagtattttctaaaatcgtacatccattat aaaggagatagatggccaattagtgaaatggaaattcgcaacaaattatctgcactgtacccgggcacgattcactatca acaaaacctacagatcatttgccgtaatgattcgaaagaatgcaaatccttacagaaatttcagaatggtaatttcacct cttacggagatttcgattggcagagagatacttactttatcaattttaacgtgtcagaacctgttgaatatacgaatgaa acaaccttacaagaggggcgtgactttgtggcggaagtaggacagtacatcatggatattccttatgaatacgaaactat tctggtctaa |
|
Protein
| Protein ID | pfu_aug2.0_1575.1_18418.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1575.1_18418.t1 MFILVISLTKYSSNNQNDVNKVDNDQSNLSTSYIPNTVHYVWCHNHTFRFEHFLSVLSTWKVLKPTEIIIHTIHNIGTDD TEIGWFDTLMSRVPVIKIQKIPQNVSECCGVPYGVYLLEKNGGIFVSENTLIIENIVPSVKENFTIGLTLYGENVSYLVA TKGDMHLQEVAFLDMHSNLAQRVFENPVYCSKSNKTKIFNLVDQTNCIEMKYLDPVVTVRSNTTLGAIVRNLLYDTTEQV LARSLLPGEIPKLVHFVWFDDKNLTFMMYLSIRSVLTVLNPDKVFIHSDSKLAGDYSEKIIKDPRVEFLHREIPEFIFGR KLDFIEHKTDVVKLNILLEYGGIYLDWNIVSVQSIDDIIATGYDAIMNIGNNTREINNGVVMAKPDSHFLKYFLKSYIHY KGDRWPISEMEIRNKLSALYPGTIHYQQNLQIICRNDSKECKSLQKFQNGNFTSYGDFDWQRDTYFINFNVSEPVEYTNE TTLQEGRDFVAEVGQYIMDIPYEYETILV |
|