Gene
| Gene Model ID | pfu_aug2.0_1579.1_31778 |
|---|---|
| Locus | scaffold1579.1 : 55706 ... 92708 : + |
| To GenomeBrowser | scaffold1579.1:55706..92708 |
| Genes list of scaffold | scaffold1579.1 |
| Synonym | pfu_aug1.0_25613.1_55082 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1579.1_31778.t1 | 2 | 1 | RhoGEF | 168 | 198 | 2.94273e-44 | 151.0 | 1.7 | 4900.0 | -2.8 |
| pfu_aug2.0_1579.1_31778.t1 | 2 | 2 | RhoGEF | 542 | 724 | 2.94273e-44 | 151.0 | 0.0 | 2.94273e-44 | 151.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1579.1_31778.t1 | gi|524889738|ref|XP_005101423.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1579.1_31778.t1 | gi|524889736|ref|XP_005101422.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1579.1_31778.t1 | gi|554839986|ref|XP_005930429.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 4-like isoform X5 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_1579.1_31778.t1 | gi|499035268|ref|XP_004568309.1| | 0.0 | |
| pfu_aug2.0_1579.1_31778.t1 | gi|554839984|ref|XP_005930428.1| | PREDICTED: FYVE, RhoGEF and PH domain-containing protein 4-like isoform X4 [Haplochromis burtoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1579.1_31778.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1579.1_31778.t1 atggacactggatacaatgtgtgctttcgcaaatgcatacacgacatattacatctctatatagtaaaaacagatgtagc atatatagaatttgtgttttgttacgggtatgcaacacaccgcaagtgcatttatccgccttcaaagcccaagtttttgg ataagttattcagcaatgtcggattgagtaaaaggaccccaaaacgacacaagaacggattgatcgtgccaattactgga attccatgtgatgtggacgaggaaggcgaggaaagtgggcaggcaatagaacataatatagaganccctatccccctgtg tgccttgcctcccacgacttcagggctccttcaaagacccaagtttttggataagttattcagcaatgtcggattaagta aaaggaccccaaaacgacataagaacggattgatcgtgccaattactggaatcccatgtgatgtggacgaggaaggcgag gaaagtgggcaggcaatagaacatagtatagaaacagaagacatacatgaggttttcagtgaccccgaacctgatctttc accagaggaagaattcaaacaagcatttaacgaagcttggtcaacacccaattctccaaaagtgtcgggtattgtaaagc agcgattgcttgatttccaaaaactaagtcaaggttgtagatgtaggtcacaatcgacgccttcatcaccacgattagtg aaaagaaattcccttcgagtgaggcagagactttgtgatcaagttaagggggatagcaccgtagcacttcagggttcaag cttttctagagatgagaattttcgaaaaagagttatgtcgaaaggatatgtgaaggctcttgtggagcaaatagacaaaa accatgatcattcagatgatgacaatcagcataacgtaagtgttgatattccaagcaatgtcaaaaatgaagaaaaagaa aagatgatcttagaggagcataatgtaaaaccgtctgttgttgcgaagcaggaaagggaaagacactcgccaacacctcc gccaaactttacaaagaaaagttctgtgattttagatagtaaaacttcgaaagaaatacaagcaacgtctgcgaaaaatt ccaaaggaaaggaaaaattaccatctacagagaaagtagaagccgataaaaaggagctcaatgaaaaacaacaaattgat agtaacatttcaacgtcatttccggctgaagacaaacatgaaaacagaatacaagaaaattcggagacgcacgatacaaa agatgaaacatgtgaagtaacttctaacgtttacgacaatataagtttgcaaaccacaaacgcttctcatacgtcatcag cagatgtgtcagagggaccaatttacgggaatgtgtctggaacattgtccactaggacttcgaatggactcactacagat ggtgagtccgggatagcatcggaaacaagcacacttggcatcactgcagcagagttgtttgactctagttggtcggactc ggaacatagttttgaggagttcagcgattatgacagcgataacaaggaggatgagtgtgataagttggaaaccggtgccg aagagtgtaaattgaaaaagatctgcaccgaattactttacacggaaaagtcgtacgtgaaaaggctgcatctactagac gtaatatttagacagagaatattggatgaaaacgagaaagaaaagttcttttcagtagatgtggtgaagcagatgttttc taatatcacgacaatccataactttcatagagatttcttattaccagtgatagagaaaaggatggaaaattgggagacgg agtccaaaataggtgatctcatgaagacgaatgcgcctttcctaaagatgtactcagagtacgtcaaaaacttcgatcat tccatggaccttataaatttatggatggataaatcatcaaaattctctcatctcatcaaggaaatccaatcgagtccaga atgtggttgtctcactctgcaacatcacatgttagagcccatccaacgtgtgcctcgttatgaaatgcttcttaaagatt acatcaaacatctagatgacgattccgcagatctaaacgatgccaaggcggcgcttgaaatggttacacaggcggctcag cactccaacgaggcaatgaaaaagatattcaacgatttactgctgatttgttgtgaacatttattgggcagctacaaagt taagacagaaattgaaatggatgggttagagatcgtagaaggagaaaatatggacattcctaacacgttttacgtcaaaa gtcgtcagaaaatcatacaactcttagatgagactccatcgggtgaatcgggacactggtgtgagacaataaaaggagtt atcaaagaattccgtcgccggaagaagtcccgggttggtgaccaaccaccgacacaagagtccctaaatgaagtgatatg tggtagatgttcatcgaagaaagcacccctagtatacgacaacaatcagccaaatagagtttgtgatatatgctacaaaa tactgaagcaggataaaccagaagagcgcggcagcgttaaagacaaaagtgtcggaccaaaagcacgcaaaatactgcag aaaaaggcaaatgagccctcggtgttgtcaggatacttacaaaagagcacagaccgaggaaaaacatggtgtcgtcgttg gtttgtggtcagcaaggagttcgctttatacgaattcaaagctcaccaagatatatgtgctttatctacacttccattac ctggatatgatgtaaataaaaacatggaaaacatggattgtgtattgtcattgtatcaccaacaaaagagggatgaggtt gttctctttaaagcagagactccggaaagcaaagacaggtcaaattag |
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Protein
| Protein ID | pfu_aug2.0_1579.1_31778.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1579.1_31778.t1 MDTGYNVCFRKCIHDILHLYIVKTDVAYIEFVFCYGYATHRKCIYPPSKPKFLDKLFSNVGLSKRTPKRHKNGLIVPITG IPCDVDEEGEESGQAIEHNIEXPIPLCALPPTTSGLLQRPKFLDKLFSNVGLSKRTPKRHKNGLIVPITGIPCDVDEEGE ESGQAIEHSIETEDIHEVFSDPEPDLSPEEEFKQAFNEAWSTPNSPKVSGIVKQRLLDFQKLSQGCRCRSQSTPSSPRLV KRNSLRVRQRLCDQVKGDSTVALQGSSFSRDENFRKRVMSKGYVKALVEQIDKNHDHSDDDNQHNVSVDIPSNVKNEEKE KMILEEHNVKPSVVAKQERERHSPTPPPNFTKKSSVILDSKTSKEIQATSAKNSKGKEKLPSTEKVEADKKELNEKQQID SNISTSFPAEDKHENRIQENSETHDTKDETCEVTSNVYDNISLQTTNASHTSSADVSEGPIYGNVSGTLSTRTSNGLTTD GESGIASETSTLGITAAELFDSSWSDSEHSFEEFSDYDSDNKEDECDKLETGAEECKLKKICTELLYTEKSYVKRLHLLD VIFRQRILDENEKEKFFSVDVVKQMFSNITTIHNFHRDFLLPVIEKRMENWETESKIGDLMKTNAPFLKMYSEYVKNFDH SMDLINLWMDKSSKFSHLIKEIQSSPECGCLTLQHHMLEPIQRVPRYEMLLKDYIKHLDDDSADLNDAKAALEMVTQAAQ HSNEAMKKIFNDLLLICCEHLLGSYKVKTEIEMDGLEIVEGENMDIPNTFYVKSRQKIIQLLDETPSGESGHWCETIKGV IKEFRRRKKSRVGDQPPTQESLNEVICGRCSSKKAPLVYDNNQPNRVCDICYKILKQDKPEERGSVKDKSVGPKARKILQ KKANEPSVLSGYLQKSTDRGKTWCRRWFVVSKEFALYEFKAHQDICALSTLPLPGYDVNKNMENMDCVLSLYHQQKRDEV VLFKAETPESKDRSN |
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