Gene
| Gene Model ID | pfu_aug2.0_1579.1_31779 |
|---|---|
| Locus | scaffold1579.1 : 109526 ... 140730 : + |
| To GenomeBrowser | scaffold1579.1:109526..140730 |
| Genes list of scaffold | scaffold1579.1 |
| Synonym | pfu_aug1.0_5576.1_52575 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1579.1_31779.t1 | 2 | 1 | adh_short | 8 | 131 | 2.2e-15 | 56.9 | 2.3e-18 | 5.6e-15 | 55.6 |
| pfu_aug2.0_1579.1_31779.t1 | 1 | 1 | adh_short_C2 | 10 | 153 | 5.0e-06 | 26.4 | 2.6e-09 | 6.4e-06 | 26.0 |
| pfu_aug2.0_1579.1_31779.t1 | 2 | 2 | adh_short | 171 | 196 | 2.2e-15 | 56.9 | 1.2 | 2900.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1579.1_31779.t1 | gi|391337270|ref|XP_003742993.1| | PREDICTED: 3-hydroxyacyl-CoA dehydrogenase type-2-like isoform 1 [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_1579.1_31779.t1 | gi|751791074|ref|XP_011205119.1| | PREDICTED: 3-hydroxyacyl-CoA dehydrogenase type-2 [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_1579.1_31779.t1 | gi|512862322|ref|XP_004890114.1| | 0.0 | |
| pfu_aug2.0_1579.1_31779.t1 | gi|751446594|ref|XP_011177395.1| | PREDICTED: 3-hydroxyacyl-CoA dehydrogenase type-2 [Bactrocera cucurbitae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1579.1_31779.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1579.1_31779.t1 atgacactgcgcccacatttacaagtaaaggtcacaaattcaaagaatgtgatccaagctgtcaacactgccgtacaaaa ctttggcaagttggatgttaatgtaaactgtgcaggagtaggaatcgcagccaaaatcttcaatgcaaagacaagtgaac ctcattccttagaagagtttcaaaaagttttgatggtcaatactatgggaactttcaatgtcatgcggttatgtgttgga gccatgaataaaaacgaaccagatctcaacggacaaagaggggttattgtcaacactgccagtattgcggcatttgaagg acaaatgggtcaggtagcatatgccgctagtaaaggaggcattgtgggaatgacattaccgttagctagagatttaagtg ttggcggtataagagtgtgtacgatagccccaggtttaattgacacaccactcctagcaagtctaccagaaagagttcgg gcgattctagtcaagaccattccttttccccaaaggctcggggacccagctgagtttgcacatctagcccaggcaatcat agagaatcctttacttaacggtttaattgacacaccactcctagcaagtctaccagaaagagttcgggcgattctagtca agaccattccttttccccaaaggctcggggacccagctgagtttgcacatctagcccaggcaatcatagagaatccttta cttaacggatacaggatagaattggattggaatgagatggataggataggatgggataggataggatag |
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Protein
| Protein ID | pfu_aug2.0_1579.1_31779.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1579.1_31779.t1 MTLRPHLQVKVTNSKNVIQAVNTAVQNFGKLDVNVNCAGVGIAAKIFNAKTSEPHSLEEFQKVLMVNTMGTFNVMRLCVG AMNKNEPDLNGQRGVIVNTASIAAFEGQMGQVAYAASKGGIVGMTLPLARDLSVGGIRVCTIAPGLIDTPLLASLPERVR AILVKTIPFPQRLGDPAEFAHLAQAIIENPLLNGLIDTPLLASLPERVRAILVKTIPFPQRLGDPAEFAHLAQAIIENPL LNGYRIELDWNEMDRIGWDRIG |
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