Gene
| Gene Model ID | pfu_aug2.0_1582.1_08456 |
|---|---|
| Locus | scaffold1582.1 : 32553 ... 36475 : - |
| To GenomeBrowser | scaffold1582.1:32553..36475 |
| Genes list of scaffold | scaffold1582.1 |
| Synonym | pfu_aug1.0_9125.1_09892 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1582.1_08456.t1 | 2 | 1 | C1q | 16 | 33 | 1.7e-15 | 57.1 | 0.64 | 3200.0 | -2.0 |
| pfu_aug2.0_1582.1_08456.t1 | 2 | 2 | C1q | 115 | 233 | 1.7e-15 | 57.1 | 4.5e-19 | 2.2e-15 | 56.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1582.1_08456.t1 | gi|617485774|ref|XP_007577218.1| | PREDICTED: caprin-2 isoform X1 [Poecilia formosa] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1582.1_08456.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1582.1_08456.t1 atgtataaacatgatgaagaaagaattgactgtgacacaagtagtgatgatcggttggattgccccagtggacagtctgc agtggtccaattacaacaacttgtcaatcaggagagcctcttaaggctgactcttgacaagcaggtacaggagatgagga cacttctgtatgaactccaaggaatttatcgagatgacatcagggaccaagtgaagtccttcacgtatagatatttggtg acggacaatataatctttaatttgacagaaggggtcatagaaaataattcggcaatcaaaggcctagcctatcgtgttgc aagcttggacacaagcatcttcttctcggtgactctcacaaacgggattacaacaacacaagcaaatcaagtggtaaggt ttgacaaagtgttttcagacaataggcggggctacgacatttcaagtggtaaatacacaattcccgctaatggaacttac ttgttgaattttgggattcttgtgccagctggggcaggatcgcaatatgtgcacttagtggtaaacgatattttgcttgt acaagtttatacagtaaggatttgggaaaacgccgaaagaactgtaattactcagctgacgcagaatgatgtggtatatg taagagccgtaggcaaaggcgcaaaacttcatggctctcaatatacagtcttctctggtatgcgtatcagagataactga |
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Protein
| Protein ID | pfu_aug2.0_1582.1_08456.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1582.1_08456.t1 MYKHDEERIDCDTSSDDRLDCPSGQSAVVQLQQLVNQESLLRLTLDKQVQEMRTLLYELQGIYRDDIRDQVKSFTYRYLV TDNIIFNLTEGVIENNSAIKGLAYRVASLDTSIFFSVTLTNGITTTQANQVVRFDKVFSDNRRGYDISSGKYTIPANGTY LLNFGILVPAGAGSQYVHLVVNDILLVQVYTVRIWENAERTVITQLTQNDVVYVRAVGKGAKLHGSQYTVFSGMRIRDN |
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