Gene
| Gene Model ID | pfu_aug2.0_15825.1_19873 |
|---|---|
| Locus | scaffold15825.1 : 1 ... 2215 : - |
| To GenomeBrowser | scaffold15825.1:1..2215 |
| Genes list of scaffold | scaffold15825.1 |
| Synonym | pfu_aug1.0_20407.1_25867 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tubulin epsilon chain | GO:0003924 GO:0005525 GO:0005874 GO:0007017 GO:0008152 GO:0051258 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_15825.1_19873.t1 | 1 | 1 | Tubulin_C | 89 | 158 | 3.3e-15 | 56.2 | 6.1e-19 | 4.5e-15 | 55.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_15825.1_19873.t1 | gi|611997923|ref|XP_007484510.1| | PREDICTED: tubulin epsilon chain isoform X4 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_15825.1_19873.t1 | gi|696991812|ref|XP_009563140.1| | PREDICTED: tubulin epsilon chain [Cuculus canorus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_15825.1_19873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15825.1_19873.t1 tcccttgtagatatagtgaacaagataggccaggctgtaccatcagctaagatgggtaaaagagtgttcgctgccagcgg ggtgaagtcagggagtgccctcacagccggggaaggagggctcagtaaaccctccgatgaacgtccatttgatagcatga ataatatagtagccaacttacttctcaatctcacaagctctgccagatttgaaggatccctgaacgtggacttgaatgag ataacgatgaacttggtaccgtttccccgacttcactaccttgtagccagtcagactccactgtatgcactagctgatgt taacttacctcctagaagattggatcagatgttttctgatgcattctccagagaccatcagctgatcaaggcagatccca aacatagtctgtatctagcatgcgctctcatggtcagaggaaatgtagaaatttctgatgtcagaaggaatatagaaag |
|
Protein
| Protein ID | pfu_aug2.0_15825.1_19873.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_15825.1_19873.t1 SLVDIVNKIGQAVPSAKMGKRVFAASGVKSGSALTAGEGGLSKPSDERPFDSMNNIVANLLLNLTSSARFEGSLNVDLNE ITMNLVPFPRLHYLVASQTPLYALADVNLPPRRLDQMFSDAFSRDHQLIKADPKHSLYLACALMVRGNVEISDVRRNIE |
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