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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1588.1_28391
Locus scaffold1588.1 : 41061 ... 53285 : -
To GenomeBrowser scaffold1588.1:41061..53285
Genes list of scaffold scaffold1588.1
Synonym pfu_aug1.0_12813.1_32259

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1588.1_28391.t1 1 1 Galactosyl_T 108 294 7.5e-40 136.6 7.9874e-44 1.2e-39 135.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1588.1_28391.t1 gi|524865917|ref|XP_005089784.1| PREDICTED: beta-1,3-galactosyltransferase 1-like [Aplysia californica] 0.0

Transcript
Transcript IDpfu_aug2.0_1588.1_28391.t1
Definition-
>pfu_aug2.0_1588.1_28391.t1
atggctagactggcaacttacatcaagtttacctccatctcattactcgtttcggtcacgtgtctaagcttgatgaacta
taatcaacatttcgtcatcatcgcatcaaaacatagaagcaggaatctacgctggttcttcggaacagatgaagatgata
ctcatcgtcatcatcatctaaatttacgtcctgtaaaaacaaaaacacaatatatcatatcagtgagtgccccttatatc
attaataatccaaatgtgtgccggaagttcgaaaaggtgtctagtttgattatggtccacactgctccggatcatatact
gcgtcgagaaaaaatgcgtagaacttggctgaataggactcactacagtccggaaaatgttttggtgattttcctcttag
gtactgtaaaaaatcaaactttgcaacaagctttagtaaacgaaagtaagaaacacggcgacataatacagggggatttc
atcgactcgtatcgaaacttgacgaacaaaggtgtaatgggatacagatggatcacagaaaattgtagaaatgcagaaat
tgtgataaagatagacgatgacgcattcataaacatgttcaaattttttgaggattattcatatcttaaagagagagaaa
agtttatttactgcaataaaatcaacaagaactcgatgccaatactacgtgatcataagagcaagtggtacgttaatgaa
tacgaatacaaagacattaaggtgttcccccatccttactgcagtggattcgttgtgtttttatcaatagacttagttcc
gccactttaccatgctgccattggaactccatttttctgggtggacgatttctttttgtttggattactgccatccagag
ttaaaaacgttcaatatgaaaaatacaacggtactttgacgttctctcatccagagggactaaaatgttacaaagaaaaa
ggacgaaattgtcagtatttgatagtgcctgccagagaaaatgagattgatgttttgtggaaaacagttataaaggatag
aactcaatccatatatggaaactattacatgcatttgaaaaaagatactagatatgttaaaagtccttatacataa

Protein
Protein IDpfu_aug2.0_1588.1_28391.t1
Definition-
>pfu_aug2.0_1588.1_28391.t1
MARLATYIKFTSISLLVSVTCLSLMNYNQHFVIIASKHRSRNLRWFFGTDEDDTHRHHHLNLRPVKTKTQYIISVSAPYI
INNPNVCRKFEKVSSLIMVHTAPDHILRREKMRRTWLNRTHYSPENVLVIFLLGTVKNQTLQQALVNESKKHGDIIQGDF
IDSYRNLTNKGVMGYRWITENCRNAEIVIKIDDDAFINMFKFFEDYSYLKEREKFIYCNKINKNSMPILRDHKSKWYVNE
YEYKDIKVFPHPYCSGFVVFLSIDLVPPLYHAAIGTPFFWVDDFFLFGLLPSRVKNVQYEKYNGTLTFSHPEGLKCYKEK
GRNCQYLIVPARENEIDVLWKTVIKDRTQSIYGNYYMHLKKDTRYVKSPYT

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