Gene
| Gene Model ID | pfu_aug2.0_1588.1_28392 |
|---|---|
| Locus | scaffold1588.1 : 73857 ... 75445 : - |
| To GenomeBrowser | scaffold1588.1:73857..75445 |
| Genes list of scaffold | scaffold1588.1 |
| Synonym | pfu_aug1.0_5888.1_09233 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1588.1_28392.t1 | 1 | 1 | Pkinase | 1 | 178 | 0.0 | 179.9 | 0.0 | 0.0 | 179.5 |
| pfu_aug2.0_1588.1_28392.t1 | 2 | 1 | Pkinase_Tyr | 1 | 172 | 3.7e-26 | 91.7 | 1.5e-29 | 4.4e-26 | 91.5 |
| pfu_aug2.0_1588.1_28392.t1 | 1 | 1 | Kinase-like | 30 | 166 | 5.2e-10 | 38.7 | 3.7e-13 | 1.1e-09 | 37.6 |
| pfu_aug2.0_1588.1_28392.t1 | 2 | 2 | Pkinase_Tyr | 187 | 202 | 3.7e-26 | 91.7 | 0.88 | 2600.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1588.1_28392.t1 | gi|676431813|ref|XP_009046373.1| | hypothetical protein LOTGIDRAFT_110662 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1588.1_28392.t1 | gi|260795955|ref|XP_002592970.1| | hypothetical protein BRAFLDRAFT_275716 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1588.1_28392.t1 | gi|675856622|ref|XP_009013871.1| | hypothetical protein HELRODRAFT_110322 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1588.1_28392.t1 | gi|556958754|ref|XP_005990217.1| | PREDICTED: testis-specific serine/threonine-protein kinase 2 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1588.1_28392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1588.1_28392.t1 atggaacatgctggtcatggcgaccttcttgaatacataaagcttcgcggagcacttccggatgaaagggccaaaacaat gttcaaacagatcgtgaatgctgtggagtatcttcatcaaaacagcattgtccatagagacttgaagtgcgaaaaccttt tattggacacaatgagcaatatcaaagtatcagattttggattttgtcggtccattgaaccgggagatctttgtaaaact tactgcggaagtgctgcctacgcagctccggaaatattacagggaattccatattttggacctatgcatgacatctggag catcggtgtcattctgtatattatggtttgtgctgcgatgccgtacgacgattccaacataaaaaagatggtcagggagc agttagagcggaaagtgtccttttcaaaatctaagaaagtttctccggaatgtaaagacttgatatacagaattcttgaa gtaaactctaaaaggcgtttaacaatacctcaaatgatgtaccatccttggctaaaggagccagcgaaggaggccacaac ctcccactccgtaaagaacatgcaacgccaagaggaaatgcaggaagcttccgatgcattaaaggcagagttaggtacag gggtaaggccaaagaccccaggaaatgccaagtcctga |
|
Protein
| Protein ID | pfu_aug2.0_1588.1_28392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1588.1_28392.t1 MEHAGHGDLLEYIKLRGALPDERAKTMFKQIVNAVEYLHQNSIVHRDLKCENLLLDTMSNIKVSDFGFCRSIEPGDLCKT YCGSAAYAAPEILQGIPYFGPMHDIWSIGVILYIMVCAAMPYDDSNIKKMVREQLERKVSFSKSKKVSPECKDLIYRILE VNSKRRLTIPQMMYHPWLKEPAKEATTSHSVKNMQRQEEMQEASDALKAELGTGVRPKTPGNAKS |
|