Gene
| Gene Model ID | pfu_aug2.0_1588.1_28395 |
|---|---|
| Locus | scaffold1588.1 : 99967 ... 114485 : - |
| To GenomeBrowser | scaffold1588.1:99967..114485 |
| Genes list of scaffold | scaffold1588.1 |
| Synonym | pfu_aug1.0_17701.1_39980 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1588.1_28395.t1 | 5 | 1 | WD40 | 96 | 123 | 5.4e-10 | 38.7 | 0.00017 | 0.62 | 10.0 |
| pfu_aug2.0_1588.1_28395.t1 | 5 | 2 | WD40 | 138 | 164 | 5.4e-10 | 38.7 | 0.015 | 54.0 | 3.8 |
| pfu_aug2.0_1588.1_28395.t1 | 5 | 3 | WD40 | 257 | 277 | 5.4e-10 | 38.7 | 0.0038 | 14.0 | 5.7 |
| pfu_aug2.0_1588.1_28395.t1 | 5 | 4 | WD40 | 306 | 332 | 5.4e-10 | 38.7 | 6.2e-07 | 0.0023 | 17.7 |
| pfu_aug2.0_1588.1_28395.t1 | 5 | 5 | WD40 | 339 | 375 | 5.4e-10 | 38.7 | 0.0012 | 4.4 | 7.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1588.1_28395.t1 | gi|699254194|ref|XP_009861346.1| | PREDICTED: WD repeat-containing protein 64-like [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1588.1_28395.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1588.1_28395.t1 atgtcggagttaacagagcagccgggggacgggctggctcgtccctacactgtggggacatttcaacataaactggacaa atttcaggacttcattaaggatataacattccaagatgtcgaggcgactcctgaagaaagacgtcaaatgatcacagagc tgtttggctattttcaatcgactgccgaggagcatgaggaaatagctgttggcgaggaggtcagcgtctttactgtatcc aagaggaggcgagtaggagaggctgccggagagaaaacccgacgagatactgtgcaatgtttacgatatgtgccgtcttt agactgttatgtttctgcatctcaaaaaggagccatttgtatctggtccacaggtttgaagttacaaagctgtgtagata taaatgaagcagcatgggtgacaggatgtgattatttgccaacattacgcagagctgtatgctgtacagagagaagtatt gtagtttgggataatcggtccaaagggaaaaaccagcatgtcttctctatcaaacctttcgagaactcccctcagtgtat atgccatgttcccactacatctaatatacatgaggacattatattatttggagatgaccagggatatattaatgtgttaa aattggccagcaaagacttgacgaccaaaaattccaaagatgctgaaaaaattcaaaatactcaacctttaccaaatttt cctatagagccagataaattaacaaataagatagtgaagaggaagattcaccatgactgggtactacaggtgaagtactt cccggagttacggtgctttgcttcatgctccccacatagtagacagtcgtttgtgctagaggaactagatcgactatatg atgatggggaagtgagaggtgtatctatatataaaggtgtgaactgttttgattactgtgccaaggccaacataattgcc actgggggtgtagacaaagtcatcagggtgtggcatcctcatatattctccagacccacagggaagctgatgggccattt atttacaattgttgatatttgttcaaatgagaaagatcaacatttaatcagcttgtctacagccagggtgttcagagtat gggatatacacacactcacatgtctacagaatactcctgtgtattcacagacaacgaggaacgaccaggtgaaaaaagaa tatactccatggtgtttgacactaaacatgagaggcttctcacagggtcctcagtga |
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Protein
| Protein ID | pfu_aug2.0_1588.1_28395.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1588.1_28395.t1 MSELTEQPGDGLARPYTVGTFQHKLDKFQDFIKDITFQDVEATPEERRQMITELFGYFQSTAEEHEEIAVGEEVSVFTVS KRRRVGEAAGEKTRRDTVQCLRYVPSLDCYVSASQKGAICIWSTGLKLQSCVDINEAAWVTGCDYLPTLRRAVCCTERSI VVWDNRSKGKNQHVFSIKPFENSPQCICHVPTTSNIHEDIILFGDDQGYINVLKLASKDLTTKNSKDAEKIQNTQPLPNF PIEPDKLTNKIVKRKIHHDWVLQVKYFPELRCFASCSPHSRQSFVLEELDRLYDDGEVRGVSIYKGVNCFDYCAKANIIA TGGVDKVIRVWHPHIFSRPTGKLMGHLFTIVDICSNEKDQHLISLSTARVFRVWDIHTLTCLQNTPVYSQTTRNDQVKKE YTPWCLTLNMRGFSQGPQ |
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