Gene
| Gene Model ID | pfu_aug2.0_1590.1_01714 |
|---|---|
| Locus | scaffold1590.1 : 99162 ... 142785 : - |
| To GenomeBrowser | scaffold1590.1:99162..142785 |
| Genes list of scaffold | scaffold1590.1 |
| Synonym | pfu_aug1.0_2445.1_01106 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1590.1_01714.t1 | 2 | 1 | F5_F8_type_C | 35 | 146 | 5.4e-23 | 81.2 | 6.8e-13 | 3.4e-09 | 36.6 |
| pfu_aug2.0_1590.1_01714.t1 | 2 | 2 | F5_F8_type_C | 185 | 310 | 5.4e-23 | 81.2 | 1.0e-14 | 5.1e-11 | 42.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1590.1_01714.t1 | gi|676479547|ref|XP_009061781.1| | hypothetical protein LOTGIDRAFT_166470 [Lottia gigantea] | 1.0e-27 |
| pfu_aug2.0_1590.1_01714.t1 | gi|524869637|ref|XP_005091610.1| | PREDICTED: putative GPI-anchored protein PB15E9.01c-like [Aplysia californica] | 3.0e-24 |
| pfu_aug2.0_1590.1_01714.t1 | gi|742214083|ref|XP_010897262.1| | PREDICTED: scavenger receptor class F member 2-like isoform X2 [Esox lucius] | 3.0e-22 |
| pfu_aug2.0_1590.1_01714.t1 | gi|742214079|ref|XP_010897261.1| | PREDICTED: scavenger receptor class F member 2-like isoform X1 [Esox lucius] | 3.0e-22 |
| pfu_aug2.0_1590.1_01714.t1 | gi|676489701|ref|XP_009065025.1| | hypothetical protein LOTGIDRAFT_176188, partial [Lottia gigantea] | 4.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_1590.1_01714.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1590.1_01714.t1 atgaatagcacagaaagaagtctacatttggcgatattttttctggcattcataccttcaacaagaggagttatcaacgt agcaacaggaaggcctacagaacaaagtaccactaaggaacaacaattttccagtttagcagtcgatggaaacttttcaa gttgcagtcacacagaaagtcaattagaaagtgcatggtggaaagctgatcttcagacaacttatattgttctaagcgtt cacattaaagtacctgtcaacagtcaatctaggagaagattagctggatattccgtattagtatcagatgcaggaaacga tacaaattacagaacatgttatgattatggcacacctgacgccttacctgatgttgcaaaggtacagatagctaattgca gtaaaccattacgtggacgcttcgttatgatttaccagagcagggaacatactcgtacactttaccctgcaaactatagt agatacgctgtgttagagctgtgtgacgttcaagtctttgttcatgcgagtcaagtggcaacaaataagccggcaaaaca aagctccaccctcatcaattattacaatgctagtaacgctgttgatggaattataggggacaagaacatggaaagctgta gtcatactgattttggacatacgacagcttggtggcttgtaaatcttgaaaagctttacctcattcaaagtattgtcatc tatcctcgaccacacaacggaacggagacccagggaagattcgccggtttttctttatcgttgtctgacagggagaatgg aagctaccatgagtgttttgattacggcaaatttggaccgatacccgatgttactgtgaagcatgtggtaaactgctttc cgcctaaacaaggacaatacattaaaattgaaaataaaagagataatggaccatacgcaactgactacagcaaatgcgcg tatctcaatttatgcgaagttgagattatagctcaagaatgtttcgatacctgcattgactgtgtatgcagcgcttgtaa agaagggttctatggagggaattgtaacagaacatgctcacgattttgtggtggcaacgggttatgcagacatgaagatg gaaggtgtaacagtcaatcgtgtttgcccggttatcatggagaacaatgtgatatgaaatgccataccagctgcatcggg aatacatgtgatttccataatggatattgttttaaatgtaatgaaagtaaatatggaataaattgcagcaagagttgtcc aacaaactgtaggtcatgtaggtctgaaacagtttgtacggaatgtgaaaatggttggtacggaagtaaatgtgagaaaa actgtagtaattgtggaagtgacaaatgcgaagtagacacaggacgatgtcaaggagaccattgcaaactcggatatttt actgtttattgcaatctaacatgctcagagaattgtgtcggatcatgtgacgttctatctggagaatgtaacaagtgcaa tgtcggatggaaaggaaatttctgtaatatagaatgtgggaataatacatttggagagaattgttcaaagacgtgtggca agtgtaaagataacttgtgtcatcatgtgtatggaagttgtcttcaaggatgtcaagatggatggtcttcaatcctctgt aatattggtgagaatattacaaacccacaagcgatcctagtaggagcaatcgggggatctgttggaggggcattgttcgt tctactgggagtatttgcagtcgtcatcatatttagacgacgaaacagaaatgacagaacttatatgttaccaagcaatt ccccagcatctgcggatgatcgcgtatatacatctattcagactcaaagaggatcacctgccattcaacagagtgaaatg gattctatacagggaaactatcagaacgctgttatggaaaacagtgaggacagtacttacatgtcaccatgcaatcctct aggtccctgtgcgctagtactccgtagaacaacatcatctgctattatatcaaggattaccatcaaatgtcggtctcagt taaaatccacctctgagtcagtcatttcataa |
|
Protein
| Protein ID | pfu_aug2.0_1590.1_01714.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1590.1_01714.t1 MNSTERSLHLAIFFLAFIPSTRGVINVATGRPTEQSTTKEQQFSSLAVDGNFSSCSHTESQLESAWWKADLQTTYIVLSV HIKVPVNSQSRRRLAGYSVLVSDAGNDTNYRTCYDYGTPDALPDVAKVQIANCSKPLRGRFVMIYQSREHTRTLYPANYS RYAVLELCDVQVFVHASQVATNKPAKQSSTLINYYNASNAVDGIIGDKNMESCSHTDFGHTTAWWLVNLEKLYLIQSIVI YPRPHNGTETQGRFAGFSLSLSDRENGSYHECFDYGKFGPIPDVTVKHVVNCFPPKQGQYIKIENKRDNGPYATDYSKCA YLNLCEVEIIAQECFDTCIDCVCSACKEGFYGGNCNRTCSRFCGGNGLCRHEDGRCNSQSCLPGYHGEQCDMKCHTSCIG NTCDFHNGYCFKCNESKYGINCSKSCPTNCRSCRSETVCTECENGWYGSKCEKNCSNCGSDKCEVDTGRCQGDHCKLGYF TVYCNLTCSENCVGSCDVLSGECNKCNVGWKGNFCNIECGNNTFGENCSKTCGKCKDNLCHHVYGSCLQGCQDGWSSILC NIGENITNPQAILVGAIGGSVGGALFVLLGVFAVVIIFRRRNRNDRTYMLPSNSPASADDRVYTSIQTQRGSPAIQQSEM DSIQGNYQNAVMENSEDSTYMSPCNPLGPCALVLRRTTSSAIISRITIKCRSQLKSTSESVIS |
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