Gene
| Gene Model ID | pfu_aug2.0_16.1_20062 |
|---|---|
| Locus | scaffold16.1 : 590499 ... 604955 : - |
| To GenomeBrowser | scaffold16.1:590499..604955 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug1.0_7747.1_17165 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gpi mannosyltransferase 3 | GO:0005783 GO:0016757 GO:0044238 GO:0044425 GO:0044710 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_16.1_20062.t1 | 2 | 1 | Glyco_transf_22 | 68 | 395 | 0.0 | 348.7 | 0.0 | 0.0 | 317.3 |
| pfu_aug2.0_16.1_20062.t1 | 2 | 2 | Glyco_transf_22 | 483 | 553 | 0.0 | 348.7 | 5.8e-12 | 4.3e-08 | 32.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_16.1_20062.t1 | gi|524870748|ref|XP_005092156.1| | PREDICTED: GPI mannosyltransferase 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_16.1_20062.t1 | gi|676421941|ref|XP_009043892.1| | hypothetical protein LOTGIDRAFT_181193, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_16.1_20062.t1 | gi|296483177|tpg|DAA25292.1| | TPA: GPI mannosyltransferase 3 [Bos taurus] | 0.0 |
| pfu_aug2.0_16.1_20062.t1 | gi|742104693|ref|XP_010835078.1| | PREDICTED: GPI mannosyltransferase 3 [Bison bison bison] | 0.0 |
| pfu_aug2.0_16.1_20062.t1 | gi|555987697|ref|XP_005905696.1| | PREDICTED: LOW QUALITY PROTEIN: GPI mannosyltransferase 3 [Bos mutus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_16.1_20062.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16.1_20062.t1 atgtcaaaaagcacagctacaataaggcgacgcaaactcaagcacagtcctgaagagtttgagaaggctaaaaatagtcg cccatgttcccctttgtgtacggacgatgagatggaagaagaagaagaaggatatttatttgatgacgaaatccttggtc cttccgtcgtacagaagatcatgtcgtcagagaagacactgttactgggactgatagccctgcgagtgtcaaatgctctg ttgattcagacagcttatgtaccagacgaatattggcaatcagtggaggtagcacatcagatggtgtttgggtatggtta cttgacatgggagtggaggacagccatcaggggatatatttatcctagtatctttgctctgttgtacaaagttctagcta tattttccttggaccacagacttcttttgataaaactgccgcgggtgttacaagggctgcttgcggcctggggagacctg tacttatacaaactatccaggaagttatcagacagagccacggcccagtggacgctgttttgtcaggtcatctcatggta tacactgtatagctgtactcgtaccttaacaaactccgtggaaactgtgctggttaccatagcaatgtattactttccgt ggccgaacattaaaagtaacagtagatcagggacgtctaagtttgtgtgttttatggttttatctatcattatacgacct accgctgctattatatgggtcctgatgtgctcatggcatctacagcagaatactacaaaactgtggaaaatcatcaaaac ctatctgaaatacgggtctatcatgctgcttgtgagtattttattggatcgctatttttacggtcagtggaccttggtgc agtacaattttctggagtttaatgtcctgcgaggtggttcagcaatgtttggtacccacccttggcattggtatgtatcc caggggtaccctgccattatgaccacgcatctgttaccatttatactgggggtctggagagccaagaacaaagtactgct gctcctcatcatatggactatcattttatacagttttctagctcataaagaatttagattccttcatcccatattaccat tatccatgcattattgtggtgtttacttcaaaagtttatgtcaaaaaccaaagttgaagaaaaaaagaactaaaagtgac gtcacagacaacgaaagtgttcatagttatagtagttcagaaagtctagtcagttcagcaagcaccgatgtcagtcagtg cacgcaatccaccgatagtcaaaacgactcaggtattggatccgcaggagcgttacctgtcgtcaatgaaattgccgatg aaggagatatggatggcagcacatgtagttcaagtcaaaagcgagatatcaaagaccaaagtgctcttgacccagtggag aaacagagacagaaacacaagtataatctgactaaagccaagattctggtggtcgtattaatcgccaccaatctacctct ggcggcgtattttggcttgatacaccagaggggtactaatgtagtgatgaagtatctatatgatgagagcttagagaagg atatggatgttatactgctgatgccatgccattctacgccctattacagctttatccatcgaaactttaccctgagattt ctcacatgtgatcctaatcttgacaaggtagagaattacatagatgagaccaacgatttcttcaacgatccttctcattg gctgagacaagaatatcacatacagggtaaaccccttcctagtcatattgtatattttaatacattacagtctgatattt cagactttctagtccagagtgggtacaaacattgtaggacttttttccacacccatctacctgagggtagggtaggaaca catgtaatggtcagttgtaggtga |
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Protein
| Protein ID | pfu_aug2.0_16.1_20062.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16.1_20062.t1 MSKSTATIRRRKLKHSPEEFEKAKNSRPCSPLCTDDEMEEEEEGYLFDDEILGPSVVQKIMSSEKTLLLGLIALRVSNAL LIQTAYVPDEYWQSVEVAHQMVFGYGYLTWEWRTAIRGYIYPSIFALLYKVLAIFSLDHRLLLIKLPRVLQGLLAAWGDL YLYKLSRKLSDRATAQWTLFCQVISWYTLYSCTRTLTNSVETVLVTIAMYYFPWPNIKSNSRSGTSKFVCFMVLSIIIRP TAAIIWVLMCSWHLQQNTTKLWKIIKTYLKYGSIMLLVSILLDRYFYGQWTLVQYNFLEFNVLRGGSAMFGTHPWHWYVS QGYPAIMTTHLLPFILGVWRAKNKVLLLLIIWTIILYSFLAHKEFRFLHPILPLSMHYCGVYFKSLCQKPKLKKKRTKSD VTDNESVHSYSSSESLVSSASTDVSQCTQSTDSQNDSGIGSAGALPVVNEIADEGDMDGSTCSSSQKRDIKDQSALDPVE KQRQKHKYNLTKAKILVVVLIATNLPLAAYFGLIHQRGTNVVMKYLYDESLEKDMDVILLMPCHSTPYYSFIHRNFTLRF LTCDPNLDKVENYIDETNDFFNDPSHWLRQEYHIQGKPLPSHIVYFNTLQSDISDFLVQSGYKHCRTFFHTHLPEGRVGT HVMVSCR |
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