Gene
| Gene Model ID | pfu_aug2.0_16.1_20067 |
|---|---|
| Locus | scaffold16.1 : 700691 ... 732634 : - |
| To GenomeBrowser | scaffold16.1:700691..732634 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug1.0_49669.1_34448 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_16.1_20067.t1 | 16 | 1 | Laminin_EGF | 229 | 263 | 8.4e-06 | 25.6 | 0.08 | 390.0 | 1.0 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 2 | Laminin_EGF | 303 | 343 | 8.4e-06 | 25.6 | 3.0 | 15000.0 | -12.9 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 3 | Laminin_EGF | 348 | 384 | 8.4e-06 | 25.6 | 0.00081 | 4.0 | 7.4 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 4 | Laminin_EGF | 392 | 434 | 8.4e-06 | 25.6 | 0.001 | 5.1 | 7.1 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 5 | Laminin_EGF | 437 | 473 | 8.4e-06 | 25.6 | 0.011 | 55.0 | 3.7 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 6 | Laminin_EGF | 484 | 525 | 8.4e-06 | 25.6 | 0.06 | 290.0 | 1.4 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 7 | Laminin_EGF | 529 | 565 | 8.4e-06 | 25.6 | 0.048 | 240.0 | 1.7 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 8 | Laminin_EGF | 576 | 611 | 8.4e-06 | 25.6 | 0.00068 | 3.4 | 7.6 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 9 | Laminin_EGF | 623 | 663 | 8.4e-06 | 25.6 | 0.62 | 3100.0 | -1.8 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 10 | Laminin_EGF | 669 | 709 | 8.4e-06 | 25.6 | 0.024 | 120.0 | 2.7 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 11 | Laminin_EGF | 715 | 750 | 8.4e-06 | 25.6 | 0.0022 | 11.0 | 6.0 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 12 | Laminin_EGF | 761 | 801 | 8.4e-06 | 25.6 | 0.0039 | 19.0 | 5.2 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 13 | Laminin_EGF | 805 | 847 | 8.4e-06 | 25.6 | 0.37 | 1800.0 | -1.1 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 14 | Laminin_EGF | 850 | 878 | 8.4e-06 | 25.6 | 0.00067 | 3.3 | 7.7 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 15 | Laminin_EGF | 880 | 911 | 8.4e-06 | 25.6 | 0.077 | 380.0 | 1.1 |
| pfu_aug2.0_16.1_20067.t1 | 16 | 16 | Laminin_EGF | 913 | 941 | 8.4e-06 | 25.6 | 0.027 | 130.0 | 2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_16.1_20067.t1 | gi|729736590|ref|XP_010564371.1| | PREDICTED: multiple epidermal growth factor-like domains protein 10 isoform X2 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_16.1_20067.t1 | gi|729736588|ref|XP_010564370.1| | PREDICTED: multiple epidermal growth factor-like domains protein 10 isoform X1 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_16.1_20067.t1 | gi|697821738|ref|XP_009647251.1| | PREDICTED: multiple epidermal growth factor-like domains protein 10 [Egretta garzetta] | 0.0 |
| pfu_aug2.0_16.1_20067.t1 | gi|675419854|ref|XP_008923369.1| | PREDICTED: multiple epidermal growth factor-like domains protein 10 [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_16.1_20067.t1 | gi|541963786|ref|XP_005437112.1| | PREDICTED: multiple epidermal growth factor-like domains protein 10 [Falco cherrug] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_16.1_20067.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16.1_20067.t1 atgtttatgcacaaaatcgataattcagaaaatcagaaaccgaaggcatacaaaatcaggataaaacaggaaccaaagca aacaaacgaaaacctccaccantatgaaaagaagccaactccagatatcggagtgagaccaggtgcccaggaagagctag ttggcaggtctctaggtttacaaaggacgcaaaacagaaaacaaacaagaaatgacttgaataatctgtttcttggaaga ccaccttatacgtttttcccaaatattatgaatgggaacccaaatcttgctacggatggtaatccggattcgtgtatatt gacttttgaatcaaaaacttctaattttggtgttcaaatggagaacatttaccccataaaacgaatagcaataacgtaca gagggacaaatcactcgtaccgcttggcaccattaaagctctatgtatcaaatacaaccgactacttagccggaactaag tgctttgaatggacggaccccactagatttccctctcagtttgaaactttaccatgcactggatacggaagctaccttac tatgactgtggatcgaagcggtttcctgtatccggcctggcgagacgatgacccacgtacaactatgtcaatctgtgagg caattgttgacggatgttccgaatatggcaagtttggtacagattgtgaccagaattgttactgtaaatacttgacatgt gattttgagagcggaatatgtccaccgggtgggtgtcaagcaggctggaagggagcgcagtgtaatcaacatatacacat tgagaaaagaattgtccaaggagatgctaatacgttttcagcttgtgatgccggtacatggggagaatcatgtgcacaga cctgtggaaactgcagagatggcgccacctgtgaaaggtttaacggtacttgtcccggtctctgcgcacctggatacaat aactctgacgtcacatgtagaacagcatgtaacataaacacatacggtcaggattgcgctcaaacatgcgcacagtgtcg agttggcaccacctgtgatcacgtgactggtgtctgcagaagtgggtgttcgcctggttacaatggaagcaaatgtgacg ctcagtgtgacacagggacatatggtgtgaattgtaccggagtgtgtgggagctgtagtggtaatattatatgtaatcac atcacaggggcctgtgacatgtgtactcctggcttctatggaatttcttgtgacaaagtgtgtgaaaatggtacatacgg tgccaactgttcagaaacctgtgaccgctgtattggaatgatgtgtaatcctgtgacaggccaatgtgataacggttgtg taccagggtaccaaggagctacatgtgatacagtttgtgacgagggacggtttggtgctaactgttcaggaatgtgtgga tactgttatgagaatgaaacctgtaatcacgtgaccggaagttgtgaagaaggttgtcagcccggatatcaaggagataa ctgcacacaattatgtgacgccggactgcatggtttcaactgctcagagtcttgtggtcaatgtcgagataatgccgtat gtatcccacaaactggtatctgcccaacaggctgtcagccaggatatcgagggagtgattgtaaattactatgtgatttt gggacatatggtgtgaactgttcgatgttgtgcggggcctgtgcaaacaacatgacatgtgacccagtcagtggtgtctg tccgggaacatgtaacccaggataccgtggatcacattgtcaggatgtttgtgattttggtacctatggactcggatgta gcggtatgtgtggttattgtttaaacaatgtcacatgtcatcacgtcacaggagactgtccaatcggctgtgagcctgga tacaaagacataaattgcagtaatgaatgttccgatggttcttacggactggggtgtaatggtacatgtggaaaatgttt tgacaacgtagcttgcgatcatgtaaccgggaactgccccggaatatgtcagcccgggtataagggttcactgtgccaag acgtttgcagttttgggacctttggtcagaactgttctagagcttgtggattttgtcgggataatgagacctgtgatcac gtgtcgggggcgtgcacaaaaggatgtcagccaggatatgttggttataattgttcttacgtttgtgattccgggacgta tggtctgaactgttcctctatatgtggcttttgtggcataaatacaacctgtgataacatcaatggaatgtgtaatggaa gctgtcagccagggtatataggcgattactgtcaaacagtgtgtgaaacaggaatgtatggagccaactgctcctctacc tgcggcttttgctctatgaacaagacttgtaatcacgtgacaggaatgtgtgatggaggctgcgaaccaggctatacagg cggaatgtgtcaaagtgattgcccttctggtaaattcggtcagaattgctcacaagtctgtggaaaatgtgacgccaacg caacatgcgatcacgtgactggaacctgtcaaggggagtgtttacctggatatattggaaacatgtgtaatgctagtgtg tgtaataatggctgtcaaccaggttacaatgggaatatgtgtgacacagcgtgtccaaatggtaccttcgggctgaattg ctcatcgtcgtgcggtcactgtagtgatcagatgccatgtgatcacgtgacaggagaatgcatgaatggttgcgcggcag gatttactggcatcgattgtgcaaatgaatgtggaattgtagtgtaa |
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Protein
| Protein ID | pfu_aug2.0_16.1_20067.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16.1_20067.t1 MFMHKIDNSENQKPKAYKIRIKQEPKQTNENLHXYEKKPTPDIGVRPGAQEELVGRSLGLQRTQNRKQTRNDLNNLFLGR PPYTFFPNIMNGNPNLATDGNPDSCILTFESKTSNFGVQMENIYPIKRIAITYRGTNHSYRLAPLKLYVSNTTDYLAGTK CFEWTDPTRFPSQFETLPCTGYGSYLTMTVDRSGFLYPAWRDDDPRTTMSICEAIVDGCSEYGKFGTDCDQNCYCKYLTC DFESGICPPGGCQAGWKGAQCNQHIHIEKRIVQGDANTFSACDAGTWGESCAQTCGNCRDGATCERFNGTCPGLCAPGYN NSDVTCRTACNINTYGQDCAQTCAQCRVGTTCDHVTGVCRSGCSPGYNGSKCDAQCDTGTYGVNCTGVCGSCSGNIICNH ITGACDMCTPGFYGISCDKVCENGTYGANCSETCDRCIGMMCNPVTGQCDNGCVPGYQGATCDTVCDEGRFGANCSGMCG YCYENETCNHVTGSCEEGCQPGYQGDNCTQLCDAGLHGFNCSESCGQCRDNAVCIPQTGICPTGCQPGYRGSDCKLLCDF GTYGVNCSMLCGACANNMTCDPVSGVCPGTCNPGYRGSHCQDVCDFGTYGLGCSGMCGYCLNNVTCHHVTGDCPIGCEPG YKDINCSNECSDGSYGLGCNGTCGKCFDNVACDHVTGNCPGICQPGYKGSLCQDVCSFGTFGQNCSRACGFCRDNETCDH VSGACTKGCQPGYVGYNCSYVCDSGTYGLNCSSICGFCGINTTCDNINGMCNGSCQPGYIGDYCQTVCETGMYGANCSST CGFCSMNKTCNHVTGMCDGGCEPGYTGGMCQSDCPSGKFGQNCSQVCGKCDANATCDHVTGTCQGECLPGYIGNMCNASV CNNGCQPGYNGNMCDTACPNGTFGLNCSSSCGHCSDQMPCDHVTGECMNGCAAGFTGIDCANECGIVV |
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