Gene
| Gene Model ID | pfu_aug2.0_16.1_20069 |
|---|---|
| Locus | scaffold16.1 : 779635 ... 795210 : + |
| To GenomeBrowser | scaffold16.1:779635..795210 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug1.0_5979.1_31097 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methylglutaconyl- mitochondrial | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_16.1_20069.t1 | 1 | 1 | ECH | 103 | 189 | 1.4e-20 | 73.5 | 1.3e-24 | 1.9e-20 | 73.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_16.1_20069.t1 | gi|586563492|ref|XP_006914992.1| | PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Pteropus alecto] | 3.0e-32 |
| pfu_aug2.0_16.1_20069.t1 | gi|759184389|ref|XP_011380531.1| | PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X1 [Pteropus vampyrus] | 6.0e-32 |
| pfu_aug2.0_16.1_20069.t1 | gi|676442590|ref|XP_009049850.1| | hypothetical protein LOTGIDRAFT_186751 [Lottia gigantea] | 2.0e-31 |
| pfu_aug2.0_16.1_20069.t1 | gi|72014175|ref|XP_782821.1| | PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X2 [Strongylocentrotus purpuratus] | 2.0e-31 |
| pfu_aug2.0_16.1_20069.t1 | gi|696995984|ref|XP_009564661.1| | PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Cuculus canorus] | 6.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_16.1_20069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16.1_20069.t1 atgtactttgcgatgaagcgtcttgtggaatgcgaaggaacccttggtgctaccataacaaatatggccgccgcgggctg tgattggctgatgcattttcgacttcttttatgcaatcgctgcacagaatttgacgaaaccttacaggaagcaagtactc aaggtcctctaccaagttcatgttttcgcgccgatcgttcaacaaatatggccgcaaacggctctgactggcagactcat tttcgacttctcatctgcatccgctccacagaattacatgaaaccttgaagcaagtacttaagtttaaagattgcaccga tgtcgtgaaatttgacaacaatctgcgagttttgattctgaaaagtgatgtgaaaggtgtattttgtgctggcgctgatc ttaaagaaagagccaaaatgactaatgaagaagttgggcctttcgtagcgggactacgagctagtgtgtccgagatggcc aatatgccgatgcccaccttggcagcaattgatgggtttgctctaggagggggactagaggtagctctggcttgtgatat gaggattacat |
|
Protein
| Protein ID | pfu_aug2.0_16.1_20069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16.1_20069.t1 MYFAMKRLVECEGTLGATITNMAAAGCDWLMHFRLLLCNRCTEFDETLQEASTQGPLPSSCFRADRSTNMAANGSDWQTH FRLLICIRSTELHETLKQVLKFKDCTDVVKFDNNLRVLILKSDVKGVFCAGADLKERAKMTNEEVGPFVAGLRASVSEMA NMPMPTLAAIDGFALGGGLEVALACDMRIT |
|