Gene
| Gene Model ID | pfu_aug2.0_1608.1_28405 |
|---|---|
| Locus | scaffold1608.1 : 11069 ... 24175 : - |
| To GenomeBrowser | scaffold1608.1:11069..24175 |
| Genes list of scaffold | scaffold1608.1 |
| Synonym | pfu_aug1.0_1719.1_44113 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1608.1_28405.t1 | 1 | 1 | CASP_C | 37 | 206 | 3.0e-37 | 127.9 | 7.6e-40 | 1.1e-36 | 126.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1608.1_28405.t1 | gi|585700378|ref|XP_006812774.1| | PREDICTED: protein CASP isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1608.1_28405.t1 | gi|676448000|ref|XP_009051591.1| | hypothetical protein LOTGIDRAFT_208887 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1608.1_28405.t1 | gi|390332858|ref|XP_780858.3| | 0.0 | |
| pfu_aug2.0_1608.1_28405.t1 | gi|268053997|gb|ACY92485.1| | CASP-like transcription factor [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1608.1_28405.t1 | gi|585700374|ref|XP_006812773.1| | PREDICTED: protein CASP isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1608.1_28405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1608.1_28405.t1 atgtcagtgtcaatttcccgtttcttgacatacggccgtcacttaccaagcgttaggggttcagcgctggatggcgttgg tgccgcggtgattcctaaagaaaagtaccacaagctacaagacgaatacaaggacaccgcgagcactgtacaggagcaga agttactcatcacgcaactagaggaagacctgcgcagtgtgaatgcgttgtcgtccatgttccggggcgaggccgagggg ggagaacccgtcaaacccccggggtcgggcgaggcggggcttgtttctgaggcagtgaaggacgtcatgtcaccaacctc accaggcgtagataagacagctgtagattctatcttacccattgtgcaaagtcagcgtgagcggtacaggatcagggctc aggaactagaagcgcattcactaggtcaacaacagcaaatctccttactacagaacgaaatagacaaactacgatctgac aatgtcaaaatgtacgaaaagatccgattcctgcagagctacccaaagaagggagggaccggcagtgaagacgcagagac taggtactccacacaatacgaggaaaaacttgaccccttctcaacgtttagcaggaaggttctatacaaacttgcctata cacagaccagtaagagggactttgccgcagaatgtcatgaaaagtttgcagctcatatgttggaagttcatggacagaaa catcagcacgcatga |
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Protein
| Protein ID | pfu_aug2.0_1608.1_28405.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1608.1_28405.t1 MSVSISRFLTYGRHLPSVRGSALDGVGAAVIPKEKYHKLQDEYKDTASTVQEQKLLITQLEEDLRSVNALSSMFRGEAEG GEPVKPPGSGEAGLVSEAVKDVMSPTSPGVDKTAVDSILPIVQSQRERYRIRAQELEAHSLGQQQQISLLQNEIDKLRSD NVKMYEKIRFLQSYPKKGGTGSEDAETRYSTQYEEKLDPFSTFSRKVLYKLAYTQTSKRDFAAECHEKFAAHMLEVHGQK HQHA |
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