Gene
| Gene Model ID | pfu_aug2.0_1612.1_08472 |
|---|---|
| Locus | scaffold1612.1 : 38496 ... 58785 : + |
| To GenomeBrowser | scaffold1612.1:38496..58785 |
| Genes list of scaffold | scaffold1612.1 |
| Synonym | pfu_aug1.0_913.1_43843 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1612.1_08472.t1 | 7 | 1 | LRR_6 | 266 | 285 | 1.6e-23 | 80.0 | 0.00025 | 0.46 | 10.7 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 1 | LRR_1 | 267 | 277 | 6.0e-10 | 37.7 | 0.58 | 1100.0 | 0.4 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 1 | LRR_7 | 267 | 277 | 4.4e-06 | 26.0 | 0.41 | 750.0 | 1.2 |
| pfu_aug2.0_1612.1_08472.t1 | 6 | 1 | LRR_4 | 269 | 304 | 1.3e-07 | 31.0 | 0.099 | 180.0 | 1.8 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 2 | LRR_6 | 291 | 313 | 1.6e-23 | 80.0 | 3.7e-06 | 0.0069 | 16.3 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 2 | LRR_1 | 295 | 305 | 6.0e-10 | 37.7 | 0.12 | 220.0 | 2.5 |
| pfu_aug2.0_1612.1_08472.t1 | 6 | 2 | LRR_4 | 296 | 335 | 1.3e-07 | 31.0 | 6.1e-05 | 0.11 | 12.1 |
| pfu_aug2.0_1612.1_08472.t1 | 3 | 1 | LRR_8 | 296 | 359 | 3.8e-06 | 26.5 | 1.6e-05 | 0.029 | 14.1 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 2 | LRR_7 | 296 | 304 | 4.4e-06 | 26.0 | 1.5 | 2800.0 | -0.6 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 3 | LRR_6 | 319 | 340 | 1.6e-23 | 80.0 | 7.0e-06 | 0.013 | 15.4 |
| pfu_aug2.0_1612.1_08472.t1 | 6 | 3 | LRR_4 | 321 | 362 | 1.3e-07 | 31.0 | 1.1e-06 | 0.002 | 17.7 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 3 | LRR_7 | 321 | 334 | 4.4e-06 | 26.0 | 0.012 | 22.0 | 5.8 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 3 | LRR_1 | 322 | 334 | 6.0e-10 | 37.7 | 0.0044 | 8.2 | 6.8 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 4 | LRR_6 | 349 | 369 | 1.6e-23 | 80.0 | 3.0e-05 | 0.056 | 13.5 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 4 | LRR_7 | 349 | 363 | 4.4e-06 | 26.0 | 0.0014 | 2.6 | 8.6 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 4 | LRR_1 | 350 | 363 | 6.0e-10 | 37.7 | 0.0022 | 4.2 | 7.7 |
| pfu_aug2.0_1612.1_08472.t1 | 6 | 4 | LRR_4 | 350 | 390 | 1.3e-07 | 31.0 | 2.7e-05 | 0.05 | 13.2 |
| pfu_aug2.0_1612.1_08472.t1 | 3 | 2 | LRR_8 | 350 | 414 | 3.8e-06 | 26.5 | 9.9e-07 | 0.0018 | 17.9 |
| pfu_aug2.0_1612.1_08472.t1 | 6 | 5 | LRR_4 | 377 | 415 | 1.3e-07 | 31.0 | 3.6e-05 | 0.067 | 12.8 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 5 | LRR_6 | 378 | 398 | 1.6e-23 | 80.0 | 3.8e-06 | 0.0071 | 16.3 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 5 | LRR_1 | 378 | 390 | 6.0e-10 | 37.7 | 0.0077 | 14.0 | 6.1 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 5 | LRR_7 | 378 | 388 | 4.4e-06 | 26.0 | 0.0079 | 15.0 | 6.3 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 6 | LRR_6 | 406 | 425 | 1.6e-23 | 80.0 | 0.00084 | 1.6 | 9.0 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 6 | LRR_1 | 406 | 417 | 6.0e-10 | 37.7 | 0.023 | 43.0 | 4.7 |
| pfu_aug2.0_1612.1_08472.t1 | 6 | 6 | LRR_4 | 406 | 440 | 1.3e-07 | 31.0 | 0.00054 | 1.0 | 9.0 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 6 | LRR_7 | 406 | 416 | 4.4e-06 | 26.0 | 0.023 | 42.0 | 4.9 |
| pfu_aug2.0_1612.1_08472.t1 | 3 | 3 | LRR_8 | 427 | 440 | 3.8e-06 | 26.5 | 0.52 | 960.0 | -0.4 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 7 | LRR_6 | 431 | 440 | 1.6e-23 | 80.0 | 0.95 | 1800.0 | -0.4 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 7 | LRR_7 | 432 | 441 | 4.4e-06 | 26.0 | 0.33 | 610.0 | 1.4 |
| pfu_aug2.0_1612.1_08472.t1 | 7 | 7 | LRR_1 | 433 | 441 | 6.0e-10 | 37.7 | 0.94 | 1700.0 | -0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1612.1_08472.t1 | gi|524881129|ref|XP_005097220.1| | PREDICTED: uncharacterized protein LOC101862498 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1612.1_08472.t1 | gi|260799079|ref|XP_002594527.1| | hypothetical protein BRAFLDRAFT_124994 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1612.1_08472.t1 | gi|156369685|ref|XP_001628105.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1612.1_08472.t1 | gi|390337577|ref|XP_001197865.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1612.1_08472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1612.1_08472.t1 atggaaaatctagaggacagtgttgagtctatagaactggaaaatcctccagcaaaccatcgtagctttatacgtcccca ctctgcaaaaccaaagaaatctgacgaccattcagagtccaagtccccagagccacaactgacaaggactctcagaccat ggaccgcaaatccaaaaacgagagctgctgtctccaaaaagaagatagtgcgtcaaaatctaaggaaatctcacatgcga cctcccagcaggtcgtcaaaatctgggtcagtctcgcccacatcaacttctaccactgatcaagctctcactgttgtcgg catagagaatgcggatctggcctatactccacgtgtatatcatctacccagagatgacgagcctgaagttggaggtatcc tagaggagggcgttagaactctaatatcagagaggataagtggagtagagagtccagtccaggagagttgggccctcacc cagatgaacgatgtgccagacacaccggacaaagataagaaaccacaccctaacgtagacacgtgggtgatgggatcccc tcatgactctgatgagtatgatacagacttagaagtggacatgatgaaaaaggaggagagagccatagatcctacaggac agacggcttaccaagatcaatgtaaacgtcaaggtttagttcccgtgtcttacttagccagacaccttggggacaggaac ttacggatgcgtcatcattacattggtggcccagcaacaaagcctattgcaagggccttagagttaaacaccataacaga gaatttggacctaggagataactacttagaggcagagggagccgtttatatagctcgagttatgaaagataacaccttta ttgtatctctggatatatcaaacaattttattggaactccaggtgccagggccatagcagatatgttagagtataactca accttaaaatctttaaatttatcagccaatcagctcactgatagagatgccagatattttatagaagcattaaaagccaa catctgcttgacttcattagatttgagtaataatgagtttggagaattaggtggcatatatcttggaggtgctttgactt ttaatgaaggtttgacagaattagatctgagttggaattccataagaaacaaaggggcagaggcaattgccaaggcttta tcgacaaatgcagttttggaggtacttgatttatcctggaatggttttggtttgcatggaacaaaaacactacagcaatc attgagggtcaacacgaagctcaaagtgctagatctcaggtacggtacatatagactgcatgcagttgcatcgattttct acatattatgtgtgaatgacttgattagagcaggctacaaatatctgaatgcatgtatttgttctctgtttgtgtacata aattgtgatctgaatttaaatgtggaaaactataagaagattcaggaaatagaaggagaaagggagataacaattctgca cagtggtataggtggtgctcagagacatacgcaacaaaacagtgtactgagagctctatccaagttcctacgtgagcaca ggtcagagttggaggacgctttcatccaacaagataaggatcgaagtggagtactacagtgtgatgaactcaaacaagca tttaaagaagcaggtctcagattaaccaatcggcagatggggttgttaatcgatgaaattgatgctcaccatgcaggatc tgtaaaatatgcagacatattatctggaaagatacttggtgacttcaacacacgcaagacttccatggcttatcgtgtac caagaagaggcagccgagccgatattctggagaacatgagaaaacgccaactcactgttatttag |
|
Protein
| Protein ID | pfu_aug2.0_1612.1_08472.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1612.1_08472.t1 MENLEDSVESIELENPPANHRSFIRPHSAKPKKSDDHSESKSPEPQLTRTLRPWTANPKTRAAVSKKKIVRQNLRKSHMR PPSRSSKSGSVSPTSTSTTDQALTVVGIENADLAYTPRVYHLPRDDEPEVGGILEEGVRTLISERISGVESPVQESWALT QMNDVPDTPDKDKKPHPNVDTWVMGSPHDSDEYDTDLEVDMMKKEERAIDPTGQTAYQDQCKRQGLVPVSYLARHLGDRN LRMRHHYIGGPATKPIARALELNTITENLDLGDNYLEAEGAVYIARVMKDNTFIVSLDISNNFIGTPGARAIADMLEYNS TLKSLNLSANQLTDRDARYFIEALKANICLTSLDLSNNEFGELGGIYLGGALTFNEGLTELDLSWNSIRNKGAEAIAKAL STNAVLEVLDLSWNGFGLHGTKTLQQSLRVNTKLKVLDLRYGTYRLHAVASIFYILCVNDLIRAGYKYLNACICSLFVYI NCDLNLNVENYKKIQEIEGEREITILHSGIGGAQRHTQQNSVLRALSKFLREHRSELEDAFIQQDKDRSGVLQCDELKQA FKEAGLRLTNRQMGLLIDEIDAHHAGSVKYADILSGKILGDFNTRKTSMAYRVPRRGSRADILENMRKRQLTVI |
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