Gene
| Gene Model ID | pfu_aug2.0_1612.1_08473 |
|---|---|
| Locus | scaffold1612.1 : 58787 ... 75015 : - |
| To GenomeBrowser | scaffold1612.1:58787..75015 |
| Genes list of scaffold | scaffold1612.1 |
| Synonym | pfu_aug1.0_12993.1_10545 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nedd8-activating enzyme e1 catalytic subunit isoform x2 | GO:0005524 GO:0005634 GO:0005829 GO:0008766 GO:0018169 GO:0019781 GO:0043773 GO:0043774 GO:0045116 GO:0070736 GO:0070737 GO:0070738 GO:0070740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1612.1_08473.t1 | 1 | 1 | ThiF | 6 | 100 | 5.7e-11 | 42.3 | 7.5e-14 | 1.9e-10 | 40.7 |
| pfu_aug2.0_1612.1_08473.t1 | 1 | 1 | UBA_e1_thiolCys | 106 | 149 | 1.9e-12 | 46.3 | 1.9e-15 | 4.7e-12 | 45.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1612.1_08473.t1 | gi|524884528|ref|XP_005098883.1| | PREDICTED: NEDD8-activating enzyme E1 catalytic subunit-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1612.1_08473.t1 | gi|241812535|ref|XP_002416471.1| | ubiquitin-activating enzyme, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_1612.1_08473.t1 | gi|736224355|ref|XP_010780793.1| | PREDICTED: NEDD8-activating enzyme E1 catalytic subunit isoform X2 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_1612.1_08473.t1 | gi|736224351|ref|XP_010780792.1| | PREDICTED: NEDD8-activating enzyme E1 catalytic subunit isoform X1 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_1612.1_08473.t1 | gi|528493974|ref|XP_005155859.1| | PREDICTED: NEDD8-activating enzyme E1 catalytic subunit isoform X1 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1612.1_08473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1612.1_08473.t1 atggctcaggtggcaaaagatgtaggaaggccgaaggctgaggtggcagcagaatttgtcaacaaaagagttccagggtg taaagttgttccacattactgtaaaatccaagattttgatgaatccttttatagaggatttcatattgttgtctgtggat tggactctattgttgcaagacggtggataaatgggatgctgttaagcttactacagtatgacgatgatggtgacttggac caaagttctataataccaatgatagatggtggaacagaggggtttaaaggcaatgccagagttatcctccctagtatgac ggcatgtgtggagtgtacactcgatctgtatccaccacagatgaattttccactatgcaccctagctcacacaccaagac tacctgaacactgtatagaatatgtcagaattctactatggcctaaagaagaaccatttggtgataaacttatagaaaac gacgtattctcgcttagtgaccgatccaggatagagcaagtcacgccatgcacgacgcaaaggaagttcaacgaattcgt tcagcttttattggcgtcaccggagccaagctgttaccaagttttccttgacgcactgacggaggagcgtcatcattaca tggtggaaagtggtgcttacgggtatggcagtaatgtggaccaaataacatcggcgatgacacgagttctgaatgatttt ggtgggaaacttacgaaggagctgtcagaaacgtacgaaaaaagacggcaggctgataaggaagagctggagcagaaaat ggaagagaagctgcagtcattcaagaaagactgggatgaagatagaaagaatatgttgaaaatgaatgaccatgctatca gtaacttactgggaagtgtggagaagctgaaacgttctaatgaagaatatgaaaaattgatggaaaaatatgaccatctc aaacagaaacaaaaagagatgagagagaaggagaccgagagatggcagcgcttgtcccaatctaacatggaaaatatcca acttaagacgacaaacgacggactgaaaggagaagtaaaggaactgaaagagaaagttaggcagcttgaggacgagaatc gagaattaagagataaagaccgtcaaagtcaagtagatctagagcatcttgtcgttgagaacaaaacccttattgcagag cttgacgagaaagagagagaacgtgccgcccttaaacaggaagttgagttagcctacggtagaattcatgaagtggtcac attccagagggaaaaatcagacatggaggatgctacttataaatctgcgttagaaaaacaatcagagaagctgaatgaga tatatgaagttgtgaacactttaaccgcccgcgaaagagtacgtgctgcaccgcgcgctatctacattggtggtaacaca ttaaccaagtcaaagacaaaattacagaataattga |
|
Protein
| Protein ID | pfu_aug2.0_1612.1_08473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1612.1_08473.t1 MAQVAKDVGRPKAEVAAEFVNKRVPGCKVVPHYCKIQDFDESFYRGFHIVVCGLDSIVARRWINGMLLSLLQYDDDGDLD QSSIIPMIDGGTEGFKGNARVILPSMTACVECTLDLYPPQMNFPLCTLAHTPRLPEHCIEYVRILLWPKEEPFGDKLIEN DVFSLSDRSRIEQVTPCTTQRKFNEFVQLLLASPEPSCYQVFLDALTEERHHYMVESGAYGYGSNVDQITSAMTRVLNDF GGKLTKELSETYEKRRQADKEELEQKMEEKLQSFKKDWDEDRKNMLKMNDHAISNLLGSVEKLKRSNEEYEKLMEKYDHL KQKQKEMREKETERWQRLSQSNMENIQLKTTNDGLKGEVKELKEKVRQLEDENRELRDKDRQSQVDLEHLVVENKTLIAE LDEKERERAALKQEVELAYGRIHEVVTFQREKSDMEDATYKSALEKQSEKLNEIYEVVNTLTARERVRAAPRAIYIGGNT LTKSKTKLQNN |
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