Gene
| Gene Model ID | pfu_aug2.0_1616.1_21716 |
|---|---|
| Locus | scaffold1616.1 : 124802 ... 135865 : - |
| To GenomeBrowser | scaffold1616.1:124802..135865 |
| Genes list of scaffold | scaffold1616.1 |
| Synonym | pfu_aug1.0_40128.1_19753 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxiredoxin- mitochondrial-like | GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1616.1_21716.t1 | 1 | 1 | Redoxin | 46 | 147 | 2.2e-23 | 82.4 | 3.5e-27 | 2.6e-23 | 82.1 |
| pfu_aug2.0_1616.1_21716.t1 | 2 | 1 | AhpC-TSA | 49 | 134 | 5.0e-11 | 42.3 | 2.4e-14 | 1.8e-10 | 40.5 |
| pfu_aug2.0_1616.1_21716.t1 | 2 | 2 | AhpC-TSA | 156 | 175 | 5.0e-11 | 42.3 | 0.16 | 1200.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1616.1_21716.t1 | gi|676471378|ref|XP_009059159.1| | hypothetical protein LOTGIDRAFT_233896 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1616.1_21716.t1 | gi|524878447|ref|XP_005095910.1| | PREDICTED: peroxiredoxin-5, mitochondrial-like [Aplysia californica] | 2.00386e-43 |
| pfu_aug2.0_1616.1_21716.t1 | gi|260783931|ref|XP_002587024.1| | hypothetical protein BRAFLDRAFT_103838 [Branchiostoma floridae] | 8.0e-40 |
| pfu_aug2.0_1616.1_21716.t1 | gi|340372149|ref|XP_003384607.1| | PREDICTED: peroxiredoxin-5, mitochondrial-like [Amphimedon queenslandica] | 3.0e-38 |
| pfu_aug2.0_1616.1_21716.t1 | gi|514688645|ref|XP_004991898.1| | peroxiredoxin V protein [Salpingoeca rosetta] | 9.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_1616.1_21716.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1616.1_21716.t1 atgtgtagggcagacagtccacctcaggcgaaacttgagggacgattaattctgcccaccagaacaatcaaatcacgtca ttccactccaaatagtggcgtgaaacttcaaggaagacgaagtccagatggggtcatcaatccacaggaattattcaaag ggaagaagggaattctcttctctgtgttgggagcttttacaccaggatgttcgttggagcatataccagagtatcttcaa caatttgaaaaattcaaggaagagggctatgatttgatatgctgtgttgctgtcaatgatccgtttgtgatggctgcatg gggaaaagatgtcaaggctgagggcaagatccggatgttagcagatccagctgctgagtttactaaggcattaaagatgg agttggactgcactaaacctcttggagggctaaggtcaaaaagtcatgtttggtatcaaataatggaagaattcagggct gacaatgaaaataagaagaaactacaattgaaaaattttgaaagtaaagaatgtgaatattccagttaa |
|
Protein
| Protein ID | pfu_aug2.0_1616.1_21716.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1616.1_21716.t1 MCRADSPPQAKLEGRLILPTRTIKSRHSTPNSGVKLQGRRSPDGVINPQELFKGKKGILFSVLGAFTPGCSLEHIPEYLQ QFEKFKEEGYDLICCVAVNDPFVMAAWGKDVKAEGKIRMLADPAAEFTKALKMELDCTKPLGGLRSKSHVWYQIMEEFRA DNENKKKLQLKNFESKECEYSS |
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