Gene
| Gene Model ID | pfu_aug2.0_1617.1_25047 |
|---|---|
| Locus | scaffold1617.1 : 46026 ... 55568 : + |
| To GenomeBrowser | scaffold1617.1:46026..55568 |
| Genes list of scaffold | scaffold1617.1 |
| Synonym | pfu_aug1.0_15411.1_25417 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1617.1_25047.t1 | 1 | 1 | RVT_1 | 208 | 354 | 1.4e-11 | 44.1 | 1.1e-14 | 3.3e-11 | 42.9 |
Transcript
| Transcript ID | pfu_aug2.0_1617.1_25047.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1617.1_25047.t1 atggattcggaacaatccactttgatgaacaactccatgctttctgatattcaatgcatgataaccgctcagttttcgaa tttcgagaggtccttttccgaacgacaaaagaaaataaacgatgaaaatttggcaaaaattgaaaatatagccagcggta ccagcgactacacgtttaaacgaaaaggtaacgaagagcagttcaaacattccgtgaaagttatggagaaactgcgagcc gccagtaattctctctcgtctccagatccagagctttcgtctactagtagcgccaaacagagtatcagtgaaggtattga acttgtaactcacagacagaaacttatcaaattggcagatagttcaaaattagggtggaaagtcgtagagcagtacgata ctcatcaactggccgatgacagtgatgatgaaaaacgcattcataaagcagaagcgagggcagaaaagttagataaagag gataagcggaagttattagagaaaggttgtgttagtgatgtcgacatagtgccagaggtcgtaacccctttgacagtcgc atttaatagagaaggcaaagctcgactggtgttagactgcaggcacataaacttgcatgttttcaaattcaaattcaagc ttgaagatgcttcaatagctagaaacatatttcaagcaggggattttgtatttacttttgatttgaaatctgcctaccat cacctatctattcatgattcgcagagaaagtatttgggttttgcatggcacttttcgggagacgacaaaatcaggtattt tgtattcaatgtactcccgtttggtatttcaagtgcatctcatattttcacaaagttgatgagacaggtagttatgtact tgagaacagacggcatcaagatcgttctttatttggacgatggattaggaggtgctaattcatacgctgctgccaaagag ttgagtatgaaggtaaggaatgacctcgtttctttagaatttcttattgcagacgagaaatgtgactgggagccctccca tacagctgcctggttaggtctgtgttggaatttagctacaggtacgttacgaatcagtgaagcgcgaattgatcgtctgt caacattcctcggtcaagtgatcactgaagtgagtaaaagtgcacaagttctcataggcgctaggcgtcttgctgcctta gctggccaaataatctctatgcagattgttttcggtactattgccagactccgtacaaggtacattttcatgactattaa ctccaaagaaagctggagtgctcctgttcttttgaacagtaatgcatttgatgaaattctatattggaaagaaaatagcg tccgattaaactgtaccgatataggtgttcagacgcagaaatctccaaaggtaaatatttacagtgatgcctctcactcg ggttatggtggctacattgcagatgttacaggtagtgatgttattggtacttggtcagaatcagagtctttagaaagctc cacttgtagagagctagaagctataaggagagtgtttaattctttggcttttgatctgaaaggatctactataaagtggt gtactgacagccaaaatgctgcaaaaatactagaaatcggtagcagaaagccgaagcttcagaacattgcgtccagtatt gcaaatggattattgcagacagatggtcagatagatgaaggaattgttcaccttcaaggagagaaagaagtctgctcagc gctacaagatcaacttaagtttcgtaaaacagttctaaaacaaagtcacgaggacaaaaaagtgttcaatgtcagtatga aatcagcatcagggaaatatgttaagttaacttcaagcgaacttaagaaaaacataaaaaagttgattgcgaatgcagca gagggactcacaactgagcaagaaaagaccggacaaccattgcttgtacagaaaaaggtggaacatacttttacagatga cgtgtacagaggggaagtaataagtgtagtgcctggatgtccagagttgtaa |
|
Protein
| Protein ID | pfu_aug2.0_1617.1_25047.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1617.1_25047.t1 MDSEQSTLMNNSMLSDIQCMITAQFSNFERSFSERQKKINDENLAKIENIASGTSDYTFKRKGNEEQFKHSVKVMEKLRA ASNSLSSPDPELSSTSSAKQSISEGIELVTHRQKLIKLADSSKLGWKVVEQYDTHQLADDSDDEKRIHKAEARAEKLDKE DKRKLLEKGCVSDVDIVPEVVTPLTVAFNREGKARLVLDCRHINLHVFKFKFKLEDASIARNIFQAGDFVFTFDLKSAYH HLSIHDSQRKYLGFAWHFSGDDKIRYFVFNVLPFGISSASHIFTKLMRQVVMYLRTDGIKIVLYLDDGLGGANSYAAAKE LSMKVRNDLVSLEFLIADEKCDWEPSHTAAWLGLCWNLATGTLRISEARIDRLSTFLGQVITEVSKSAQVLIGARRLAAL AGQIISMQIVFGTIARLRTRYIFMTINSKESWSAPVLLNSNAFDEILYWKENSVRLNCTDIGVQTQKSPKVNIYSDASHS GYGGYIADVTGSDVIGTWSESESLESSTCRELEAIRRVFNSLAFDLKGSTIKWCTDSQNAAKILEIGSRKPKLQNIASSI ANGLLQTDGQIDEGIVHLQGEKEVCSALQDQLKFRKTVLKQSHEDKKVFNVSMKSASGKYVKLTSSELKKNIKKLIANAA EGLTTEQEKTGQPLLVQKKVEHTFTDDVYRGEVISVVPGCPEL |
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