Gene
| Gene Model ID | pfu_aug2.0_1618.1_28410 |
|---|---|
| Locus | scaffold1618.1 : 22246 ... 37958 : + |
| To GenomeBrowser | scaffold1618.1:22246..37958 |
| Genes list of scaffold | scaffold1618.1 |
| Synonym | pfu_aug1.0_2739.1_59023 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1618.1_28410.t1 | 1 | 1 | Neur_chan_LBD | 30 | 231 | 2.7e-32 | 111.6 | 4.9e-36 | 3.6e-32 | 111.2 |
| pfu_aug2.0_1618.1_28410.t1 | 2 | 1 | Neur_chan_memb | 239 | 353 | 1.9e-14 | 54.1 | 2.5e-18 | 1.9e-14 | 54.1 |
| pfu_aug2.0_1618.1_28410.t1 | 2 | 2 | Neur_chan_memb | 410 | 418 | 1.9e-14 | 54.1 | 2.0 | 15000.0 | -5.8 |
Transcript
| Transcript ID | pfu_aug2.0_1618.1_28410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1618.1_28410.t1 atgtggacagttagaattttcattttactgatgggagccgtagcactggtcaaacaaactgattcctgggtgataaacga cacaaatactctccataccgatttgcttagaggctacaataaaaatatcagaggaaattttgaccagtccacatcaacca ttctctacgtacgttttttcatcagcagcgtaaactctttcgatgtcatgacgggaactctagcaatagtgggatatttc gatatcatctgggtcgatgaacgtatgacgtgggaatcgtctgcttacaacggcaccacccacatcgtgttcaaccaaga tgacgtctggacccctgtggtcatactgggtaacggcaatggagaggatgggctggagacgttagggaatagttatcttc aagtcaggtacttccctaatggacaatctaattggaatcccggagataaatatgaaacattttgtggtgccaacatcaag gactacccctatgacgctcagtggtgtgaggtccagtttataccttggggatattcagcaaacgagattcaattcagttt aatcgaatcggaatgtaatcagaatttatacagcgccaacggtcagtgggagttacaggaatgctacttagatactcttt atgtagccgaatctacacaactcctgcgactgaatctgcaactcaaaaggcgtgcatctttttactttgtaagcttgata ctaccgataggggcgctgggcgtgctgaatctactagtatttttgcttccacccgagtcaggggaaaggattggctattc tataacgctacttttagctatttgtgtgtttttaacgatagcgtcagacaacctgcctcagtcctcttacccctcgtttt cattcctgtgtaccaaacttctgattgatatgatgatcagctcattggtcgtgctttttaccatcattggactacgtttt tacttcaaaaatgacgaacataaagtgccagattgtgtcgctgctgttgcaagctgcatcctttgccgctgctgtagaag cggtcgccgtgagaaaagtgtgtatgagcgagaggtggtcatacagaccaatggaaatccttatttcatggacgggaagt tgcctagacttgaagtaaatgagacaaaaggaggaaaggaaacaggatataatgcaccaagaaaacgtatcacatggact gacgtggggatcgccagcgatattgttttctttgtctttacattgcttgcttttatcatatcacatgtggcatactttat atatgtgaatgttgtagaaattgataaaccaacataa |
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Protein
| Protein ID | pfu_aug2.0_1618.1_28410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1618.1_28410.t1 MWTVRIFILLMGAVALVKQTDSWVINDTNTLHTDLLRGYNKNIRGNFDQSTSTILYVRFFISSVNSFDVMTGTLAIVGYF DIIWVDERMTWESSAYNGTTHIVFNQDDVWTPVVILGNGNGEDGLETLGNSYLQVRYFPNGQSNWNPGDKYETFCGANIK DYPYDAQWCEVQFIPWGYSANEIQFSLIESECNQNLYSANGQWELQECYLDTLYVAESTQLLRLNLQLKRRASFYFVSLI LPIGALGVLNLLVFLLPPESGERIGYSITLLLAICVFLTIASDNLPQSSYPSFSFLCTKLLIDMMISSLVVLFTIIGLRF YFKNDEHKVPDCVAAVASCILCRCCRSGRREKSVYEREVVIQTNGNPYFMDGKLPRLEVNETKGGKETGYNAPRKRITWT DVGIASDIVFFVFTLLAFIISHVAYFIYVNVVEIDKPT |
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