Gene
| Gene Model ID | pfu_aug2.0_162.1_07069 |
|---|---|
| Locus | scaffold162.1 : 81685 ... 98935 : - |
| To GenomeBrowser | scaffold162.1:81685..98935 |
| Genes list of scaffold | scaffold162.1 |
| Synonym | pfu_aug1.0_24742.1_19030 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| inhibitor of growth protein 3 | GO:0000812 GO:0004402 GO:0005730 GO:0005737 GO:0032777 GO:0035064 GO:0043065 GO:0043967 GO:0043968 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_162.1_07069.t1 | 2 | 1 | ING | 2 | 91 | 3.2e-22 | 78.7 | 1.7e-25 | 3.2e-22 | 78.7 |
| pfu_aug2.0_162.1_07069.t1 | 2 | 1 | PHD | 33 | 45 | 5.0e-07 | 29.2 | 2.2 | 4100.0 | -2.5 |
| pfu_aug2.0_162.1_07069.t1 | 2 | 2 | ING | 312 | 328 | 3.2e-22 | 78.7 | 8.0 | 15000.0 | -3.9 |
| pfu_aug2.0_162.1_07069.t1 | 2 | 2 | PHD | 387 | 429 | 5.0e-07 | 29.2 | 2.7e-10 | 5.0e-07 | 29.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_162.1_07069.t1 | gi|524887978|ref|XP_005100568.1| | PREDICTED: inhibitor of growth protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_162.1_07069.t1 | gi|74153199|dbj|BAE43273.1| | unnamed protein product [Mus musculus] | 0.0 |
| pfu_aug2.0_162.1_07069.t1 | gi|17390799|gb|AAH18342.1| | Inhibitor of growth family, member 3 [Mus musculus] | 0.0 |
| pfu_aug2.0_162.1_07069.t1 | gi|139948756|ref|NP_076115.3| | inhibitor of growth protein 3 [Mus musculus] | 0.0 |
| pfu_aug2.0_162.1_07069.t1 | gi|10863865|gb|AAG23286.1| | p47 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_162.1_07069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07069.t1 atggaaatgcgagaaagattaacagagatgagagaaatggacttgcaagtacagaatgctttggacaatctagatgaaag agtgaaaactttcttcaagaagtgcacccaaccaaatatgaaacaggagtggaaggatgagcaattcaaaagtataaaac aggaatattacaaatcactagaagatgcagatgagaaggttcagttagccaatcatatttatgatctggttgatagacat ttaagaaaacttgatcaggagttatcaaaattcaaaatggaactggaagctgacaatgctggaatcacagaaatattaga gaaaagatcattggagttggataaaacaccatctttaggaggcagtcgtggagaaaagcggaaattgaatcattcacaac catcactgtcaaaccattcagagaagaggatccatgtagctacagagaaagttttatcatctatagccaatgaagctgcc agagagaccatgggtatcagtggtcagcgtagacagtcaagttcagggtcaaactcgccggctctgtccatgttcaactc aacatcaactccatctatatcatatagcttaggtcacatgggtgcagctggtagtaatgcagctatagcagcagccgcct cacaagccattgcagccactcaacaagtgagccaaatattattattcatgacaggtcacatgggtgcagctggtagtaat gcagctatagcagcagcggcctcacaagccattgcagccactcaacaagtgatgggacagcagggtaggaggacacccag catgaaggctagttatgttgctttagctaaaaactcagacttggcaaaggaactaaccctcggcaaagacttaacgtata gctctgcaccaactacccctaccacatcaatagaggttccaacaaaaacaccgaaaaccaaaaaacaatcctcaaaagca tctcagctacttcaacaaagccaaccatcaccaagcattcccacgtctctcccatctctcctcacgtccagtcaaccacg aacccctcaggtgccacaggatgcctcccctctcgtagaagatcttagttctgagctgcagatagtagacgagaatgggc agccggttgactggcagaacgatcctaatgaaccaagatactgtctgtgtaaccaagtgtcgtacggagacatggttggt tgtgataatgaagattgtccaatagagtggttccattatggctgtgttggactgacacaggctcctaaagtggtattggc tgagtggcttatagattttactgtgcaaatttga |
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Protein
| Protein ID | pfu_aug2.0_162.1_07069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07069.t1 MEMRERLTEMREMDLQVQNALDNLDERVKTFFKKCTQPNMKQEWKDEQFKSIKQEYYKSLEDADEKVQLANHIYDLVDRH LRKLDQELSKFKMELEADNAGITEILEKRSLELDKTPSLGGSRGEKRKLNHSQPSLSNHSEKRIHVATEKVLSSIANEAA RETMGISGQRRQSSSGSNSPALSMFNSTSTPSISYSLGHMGAAGSNAAIAAAASQAIAATQQVSQILLFMTGHMGAAGSN AAIAAAASQAIAATQQVMGQQGRRTPSMKASYVALAKNSDLAKELTLGKDLTYSSAPTTPTTSIEVPTKTPKTKKQSSKA SQLLQQSQPSPSIPTSLPSLLTSSQPRTPQVPQDASPLVEDLSSELQIVDENGQPVDWQNDPNEPRYCLCNQVSYGDMVG CDNEDCPIEWFHYGCVGLTQAPKVVLAEWLIDFTVQI |
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