Gene
| Gene Model ID | pfu_aug2.0_162.1_07070 |
|---|---|
| Locus | scaffold162.1 : 106076 ... 114197 : + |
| To GenomeBrowser | scaffold162.1:106076..114197 |
| Genes list of scaffold | scaffold162.1 |
| Synonym | pfu_aug1.0_5556.1_30985 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glycine cleavage system protein t | GO:0004047 GO:0006546 GO:0008483 GO:0032259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_162.1_07070.t1 | 1 | 1 | GCV_T | 66 | 281 | 0.0 | 207.4 | 0.0 | 0.0 | 207.1 |
| pfu_aug2.0_162.1_07070.t1 | 1 | 1 | GCV_T_C | 291 | 383 | 9.8e-22 | 76.7 | 3.7e-25 | 1.9e-21 | 75.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_162.1_07070.t1 | gi|676494973|ref|XP_009066738.1| | hypothetical protein LOTGIDRAFT_134479, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_162.1_07070.t1 | gi|524887980|ref|XP_005100569.1| | PREDICTED: aminomethyltransferase, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_162.1_07070.t1 | gi|597749621|ref|XP_007236741.1| | PREDICTED: aminomethyltransferase, mitochondrial-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_162.1_07070.t1 | gi|657557563|ref|XP_008282947.1| | PREDICTED: aminomethyltransferase, mitochondrial [Stegastes partitus] | 0.0 |
| pfu_aug2.0_162.1_07070.t1 | gi|551497349|ref|XP_005800229.1| | PREDICTED: aminomethyltransferase, mitochondrial-like [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_162.1_07070.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07070.t1 atgacatttattctatatatatgcaccacagttgtcctcttcattcttgttttccaggatctgaagaggacagttttata tgatttccatgtgaatcatggagggaaaatggtaccctttgcaggatgggagatgcctgttcaatataaagaaggaatct ccacttctcatctccatgtcagatctgctgctggtctgtttgatgtctcccacatgttacaaaccagaattcatggtaaa gacagaatctcctttattgagagcctcatagttggtgacattgaatctctgaaagacaaccagggtactctatctgtgtt caccaatgaaaatggaggaatacttgacgatctgattgtaaataaaacagatgaaggatatttgtatgtagtgtctaatg ctggttgtatggacaaagatttacagaatatgcagaagagagaacttgaatgtaagaagaagggaatggatattgaagtt gaggttctctgcaatggacttctagctctccaaggacctgcaatggcgagagttttacaagagggagtagactttgattt atcacaacttccgtttatgaccaacaaggtgatggatgtgtttggaattccaggatgccgagtcacaagatgtggttata ctggagaggatggcgtggagatttcagtagacagtgacaaaactgagagtctggcagaggctttaataaattccaagcaa ggtgaagtccatctcactggtctgggagcaagagacagcttacgtttagaggcaggattgtgcctatatggaaacgacat agacgaaaatacatcacctgtagaagcttctctcacttggacgatagggaaaagaagaaaagaattagccaattttccag gagcatctgtcatcctcaaccaaatcaaaaacaaaccaagcagaagaagagttggttttctatctcagggccctcctgtt agaggtcatacaaagatctatgatgaatctggtagtgaggtgataggagaggttacaagtggatgtccttcaccttccct caaacagaatgtatccatgggatatgtgaaattaccttacaccaaaaatggtacaaaggtcaagtttgaagtcaggaaga aaatggtggatggagtagtaactaaaatgccatttgtgccatcaaactatttcattccaaagaaaaattaa |
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Protein
| Protein ID | pfu_aug2.0_162.1_07070.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07070.t1 MTFILYICTTVVLFILVFQDLKRTVLYDFHVNHGGKMVPFAGWEMPVQYKEGISTSHLHVRSAAGLFDVSHMLQTRIHGK DRISFIESLIVGDIESLKDNQGTLSVFTNENGGILDDLIVNKTDEGYLYVVSNAGCMDKDLQNMQKRELECKKKGMDIEV EVLCNGLLALQGPAMARVLQEGVDFDLSQLPFMTNKVMDVFGIPGCRVTRCGYTGEDGVEISVDSDKTESLAEALINSKQ GEVHLTGLGARDSLRLEAGLCLYGNDIDENTSPVEASLTWTIGKRRKELANFPGASVILNQIKNKPSRRRVGFLSQGPPV RGHTKIYDESGSEVIGEVTSGCPSPSLKQNVSMGYVKLPYTKNGTKVKFEVRKKMVDGVVTKMPFVPSNYFIPKKN |
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