Gene
| Gene Model ID | pfu_aug2.0_162.1_07071 |
|---|---|
| Locus | scaffold162.1 : 114933 ... 125475 : - |
| To GenomeBrowser | scaffold162.1:114933..125475 |
| Genes list of scaffold | scaffold162.1 |
| Synonym | pfu_aug1.0_5556.1_30986 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium-independent phospholipase a2-gamma isoform x2 | GO:0005622 GO:0033559 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_162.1_07071.t1 | 2 | 1 | Patatin | 156 | 262 | 1.3e-08 | 34.9 | 7.1e-11 | 5.3e-07 | 29.7 |
| pfu_aug2.0_162.1_07071.t1 | 2 | 2 | Patatin | 264 | 277 | 1.3e-08 | 34.9 | 0.017 | 120.0 | 2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_162.1_07071.t1 | gi|488544202|ref|XP_004463653.1| | 0.0 | |
| pfu_aug2.0_162.1_07071.t1 | gi|635115629|ref|XP_007980785.1| | PREDICTED: calcium-independent phospholipase A2-gamma isoform X2 [Chlorocebus sabaeus] | 0.0 |
| pfu_aug2.0_162.1_07071.t1 | gi|544422243|ref|XP_005550592.1| | PREDICTED: calcium-independent phospholipase A2-gamma isoform X4 [Macaca fascicularis] | 0.0 |
| pfu_aug2.0_162.1_07071.t1 | gi|465970818|ref|XP_004263389.1| | PREDICTED: calcium-independent phospholipase A2-gamma isoform X2 [Orcinus orca] | 0.0 |
| pfu_aug2.0_162.1_07071.t1 | gi|675673923|ref|XP_009000952.1| | PREDICTED: calcium-independent phospholipase A2-gamma isoform X2 [Callithrix jacchus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_162.1_07071.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07071.t1 atgtcagcatttcgcacaacacaaggatgttctaatctgtttgagaattctttaattcgtttcattcctcgacaccaagt tccatgctcagataagaatcatctagtaaaactgtccgatggccaaatagtcnccgcaccagaggtagtcaaacaaggaa aaaacttaaccagcaatgctgtagacattccagcaaagacagatggcaagccatggggatttaataagttttcgtggttt gcagatccgagatttcaatttaaggcaacacggcaagaagctggagagttaacaaagaaagaagtgaaaaaagtagtaaa taaggaatatatctcaaaagaagatttagagagaagaacaaaagaacttgtctatctacagaaaaaggccgtatccaaca gctctagacggaccagggcacaaaaattatgtgatcatctattgctttatcctgatactagacagggccttgttgcttta aaaagcttgcgtgagttagagaggcgatgtggcaaacctttgtatctagtgtttgactatgtttgtggtgtgagtaccgg gtcacttattctggccatagtgttcttgttcaaacggagtatatcggagtgtgaggagctgtacatagagaaaagcaagc agatgtttacacagagtagagtcaggggaagtattggtttggccaaggatgcttcattctacaatactgaactatggcaa tcaatacttagggatctcatgaaagaaaaaacaatgattgacttctcaagggaccacgaatgtccaaaagatggtggagt actgacaaataatcccacagccatcgccatacacgagtccaagttactttggccccgagagaagatacagtgtattgtgt cccttggtaatggtagatatgaacctgacctggaaatcatctctactgacttatctacaagacaacaactgtcaaacttg attgaatcttcatctgatacagaggctgttcatctcctagtacaagatatgttaccactcaacacctactacagatttaa tccatacatttccgaggacatcttactgaatgagatacgcatggagaagctgaaccatctacaacaggacactatattgt atctacgtaggaactcacaaaagttagacaatgcttgtgctcagttgttacgtcgaaggagtactacccaaggcgctgta gacagtatcaacttatttctggacaaagaacctctggccagattaattttattattctactttttataa |
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Protein
| Protein ID | pfu_aug2.0_162.1_07071.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07071.t1 MSAFRTTQGCSNLFENSLIRFIPRHQVPCSDKNHLVKLSDGQIVXAPEVVKQGKNLTSNAVDIPAKTDGKPWGFNKFSWF ADPRFQFKATRQEAGELTKKEVKKVVNKEYISKEDLERRTKELVYLQKKAVSNSSRRTRAQKLCDHLLLYPDTRQGLVAL KSLRELERRCGKPLYLVFDYVCGVSTGSLILAIVFLFKRSISECEELYIEKSKQMFTQSRVRGSIGLAKDASFYNTELWQ SILRDLMKEKTMIDFSRDHECPKDGGVLTNNPTAIAIHESKLLWPREKIQCIVSLGNGRYEPDLEIISTDLSTRQQLSNL IESSSDTEAVHLLVQDMLPLNTYYRFNPYISEDILLNEIRMEKLNHLQQDTILYLRRNSQKLDNACAQLLRRRSTTQGAV DSINLFLDKEPLARLILLFYFL |
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