Gene
| Gene Model ID | pfu_aug2.0_162.1_07072 |
|---|---|
| Locus | scaffold162.1 : 135866 ... 150800 : + |
| To GenomeBrowser | scaffold162.1:135866..150800 |
| Genes list of scaffold | scaffold162.1 |
| Synonym | pfu_aug1.0_12547.1_68517 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_162.1_07072.t1 | 1 | 1 | SHQ1 | 228 | 409 | 0.0 | 198.5 | 0.0 | 0.0 | 197.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_162.1_07072.t1 | gi|332231523|ref|XP_003264945.1| | PREDICTED: protein SHQ1 homolog isoform X1 [Nomascus leucogenys] | 0.0 |
| pfu_aug2.0_162.1_07072.t1 | gi|634866313|ref|XP_007945522.1| | PREDICTED: protein SHQ1 homolog [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_162.1_07072.t1 | gi|471364423|ref|XP_004372760.1| | PREDICTED: protein SHQ1 homolog [Trichechus manatus latirostris] | 0.0 |
| pfu_aug2.0_162.1_07072.t1 | gi|669264748|ref|XP_008641837.1| | PREDICTED: protein SHQ1 homolog [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_162.1_07072.t1 | gi|586488439|ref|XP_006874695.1| | PREDICTED: protein SHQ1 homolog [Chrysochloris asiatica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_162.1_07072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07072.t1 atgttgactccagccttcagtattacacagagcaagcaggatttaactatacttataaaggcaccatttgcaaggataac agacactgaaattttcattgaggatacagaattcagatttttctctcagccatactttttacgtcttaatttacctgggt gcatcgtagaagatggttcagagtctgccaagtatgattctgatacaggaagttttacgattaaagtgccaaaaaagttt ccaggagaagaattcattggtttggatatgctgacaaccctccttacaccaaaatgtaaaagttccattaaaccatgtga aattgaggttgttggtgaggaagatatccagaatgatgtcacaaaggatgaaggagaggatatagagaattttgattggc acattgaacagcatccctttcaagaagtagcaatttcattggatgctcccaaatatggatttgccaatcaaagatctggg gtttttaacatccttaaggatgaagtgtatgaagtggtggacatcaaagatccagatagtgttccagcgtgtaagaggag acaactccgcctggaagcagagaatgcaaagtttgatcctgaatattatttgggagacttctatgaagacagtgctatca aagaagtaatgaaatatgaacctcaatggagcactaaagccactggatctttaaatgatattgagtttactgaagaagaa aatgaaaccatgagaaacttaccaagaaaagaatatcttttagataatgattcagaaacagccttgtatttaggactggt tgatatactatgtgcttatgcctacaatgtccgaacaacagagggagaaaacaatgtagaatcagcatggaccgtttgta aactgagctcaactttatcttggctggaggtatgtagagagagttttgaagacttggaagcagttgcctcaagtttcatg aggagaagtctctgctatcctttgtacagaaactggaatctctccatgaaggtgttacaagacacagctcatttactttg cagagggaaacaaacaatactaaggatcctactggagatacattcgttgttcagtgagagttacccacgttacatactga atgacctctatgtcaaagactacagtgtttggattcaaactacaagcaatgacagattgaaatccctaggtactgcattt gaaaagatctcgctacagaagtctgaggtggggtttgatctgtgtgcgttagaacaattaaccatagatgatgatgcttc cttatcaacagcaatggcatcagtcaaaatacatattgctgaaacagacagtgatgacagtggtgatgaagatagtgatg atgaagttgatagtagtgatgaagatgacagttcagaaagtgatgccaaaaaatgtagtgttagtgatgggcagaaacct agtgctggcaaatctgataatgattga |
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Protein
| Protein ID | pfu_aug2.0_162.1_07072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07072.t1 MLTPAFSITQSKQDLTILIKAPFARITDTEIFIEDTEFRFFSQPYFLRLNLPGCIVEDGSESAKYDSDTGSFTIKVPKKF PGEEFIGLDMLTTLLTPKCKSSIKPCEIEVVGEEDIQNDVTKDEGEDIENFDWHIEQHPFQEVAISLDAPKYGFANQRSG VFNILKDEVYEVVDIKDPDSVPACKRRQLRLEAENAKFDPEYYLGDFYEDSAIKEVMKYEPQWSTKATGSLNDIEFTEEE NETMRNLPRKEYLLDNDSETALYLGLVDILCAYAYNVRTTEGENNVESAWTVCKLSSTLSWLEVCRESFEDLEAVASSFM RRSLCYPLYRNWNLSMKVLQDTAHLLCRGKQTILRILLEIHSLFSESYPRYILNDLYVKDYSVWIQTTSNDRLKSLGTAF EKISLQKSEVGFDLCALEQLTIDDDASLSTAMASVKIHIAETDSDDSGDEDSDDEVDSSDEDDSSESDAKKCSVSDGQKP SAGKSDND |
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