Gene
| Gene Model ID | pfu_aug2.0_162.1_07080 |
|---|---|
| Locus | scaffold162.1 : 229851 ... 231425 : + |
| To GenomeBrowser | scaffold162.1:229851..231425 |
| Genes list of scaffold | scaffold162.1 |
| Synonym | pfu_aug1.0_4099.1_08804 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nanos homolog 1 | GO:0001555 GO:0005488 GO:0036099 GO:0043186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_162.1_07080.t1 | 1 | 1 | zf-nanos | 134 | 188 | 3.3e-27 | 94.2 | 9.7e-31 | 4.8e-27 | 93.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_162.1_07080.t1 | gi|260827977|ref|XP_002608940.1| | hypothetical protein BRAFLDRAFT_85485 [Branchiostoma floridae] | 6.0e-26 |
| pfu_aug2.0_162.1_07080.t1 | gi|697459924|ref|XP_009666966.1| | PREDICTED: nanos homolog 1, partial [Struthio camelus australis] | 5.0e-25 |
| pfu_aug2.0_162.1_07080.t1 | gi|696961041|ref|XP_009568883.1| | PREDICTED: nanos homolog 1 [Cuculus canorus] | 5.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_162.1_07080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07080.t1 atgtctcaatacgaaccgtttcacaactactttggaatagatatcgctggaaacaaggatcttgtaacaaatttaaataa tcttatggactttgcaccttcatcagtttttgatgaaaacagctgtgacagtgattttaattttaattttcgtttggacg tcaacggattcggaacctttgatcccctggacagtattagacgagattcgttggatgattttcgtatgaacggaagagag tgtgatcttgatgagctggacagttatcaggtggaattaagacgacagtcgactaaggagaggctggccatccaacagga gagtaacccggtagtgctagaggtcctcgctttcaaagaacgcaaaagagccgcaaggaaagccaaacagaagagcattt gtgtattttgtaaaaacaatggtgaaacggcgagcatttacacaagtcatgtattgaaagatgaggatggaagagtgacc tgtcccattctccgtaaatatatgtgtcccctgtgcggcatatctggtgacaacgcccatacgattcgctactgtccaaa gaatgagggggagtctgcccccagcctcacgttgagaacgaagcgcatcagtaccggcaagaaacgcaagtcatccgtgg aaacagattaa |
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Protein
| Protein ID | pfu_aug2.0_162.1_07080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_162.1_07080.t1 MSQYEPFHNYFGIDIAGNKDLVTNLNNLMDFAPSSVFDENSCDSDFNFNFRLDVNGFGTFDPLDSIRRDSLDDFRMNGRE CDLDELDSYQVELRRQSTKERLAIQQESNPVVLEVLAFKERKRAARKAKQKSICVFCKNNGETASIYTSHVLKDEDGRVT CPILRKYMCPLCGISGDNAHTIRYCPKNEGESAPSLTLRTKRISTGKKRKSSVETD |
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