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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1623.1_11773
Locus scaffold1623.1 : 89220 ... 93025 : -
To GenomeBrowser scaffold1623.1:89220..93025
Genes list of scaffold scaffold1623.1
Synonym pfu_aug1.0_21494.1_54762

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1623.1_11773.t1 1 1 7tm_1 51 393 4.5e-31 107.9 8.6e-35 6.4e-31 107.4

Transcript
Transcript IDpfu_aug2.0_1623.1_11773.t1
Definition-
>pfu_aug2.0_1623.1_11773.t1
atgcaaaattacagccattttcatgtgataataacagaaagagtggaagtttttcattatgagaccgtgtcagaatggaa
cgatgtactggccagaatatatactctcagtactgtgattcaagctgtgtttcttgttttaggaatattcggaaacagtt
tagtaattgtaatttacaaaaccaaaatgaaaagtaaaaaagacgatcggtacttcattccggcactggcagtgatagac
tttatgggaagcgcgtttgcttccactttttcccttgttcagaatgtgagacccgtgatgttccctggatcgttctcttg
taaattcttaaactatggaacatctacttttatcatagcatcgctcgttcttcttctcattatctcaattcagagatacc
agaaaatatgccggcctttcggattccaaatgtccatgagtgtgaaaaggttagcaatatttttgacatttttgattgga
aatatattgtcgattcctgtgacaatcttgtatcagaccgtaggcattagaaatcaacactttaacggaactggaaccac
ctgtggtaatgcaccgggcatggaacgatttggtgacatttatagaggtattattatttttgcagaggttcttgctatca
tatgcatgagttttctgtatgtgttggtaggaagaaaactttttaaacaattcagtctttcaaggaaattaaaacaaact
gcaagagtagatatagctaggaaagaaatccttaacaataacgcctctgatgatataaatacttctaaagaagaaattat
cgaaagctctttagaggaagagcaacaacaaaacaccgaacgagtcaataggatagtccccaaagagaccccacgacgac
caccaagacgcaacttttcaaacgtcagtacgactacgtatactgggcgtcagaattcatgcacgtcatcagtcgggtac
gagaatcgaccattcagtcacagcgctaggagatactctctgatgttcatggttatatccctggtagccatactatgctt
cattccaccatggatactgattttactggagtccaaaaacgactatttttggaataatctgagttattccgcggcacaag
cctgctcagtaatacgtagactgtacatagtgaaccacattgccaacccgtttatctacggcttcttcgacagtaaattc
agacatgaaattaaaagaattctctgtagatgtttgaagtga

Protein
Protein IDpfu_aug2.0_1623.1_11773.t1
Definition-
>pfu_aug2.0_1623.1_11773.t1
MQNYSHFHVIITERVEVFHYETVSEWNDVLARIYTLSTVIQAVFLVLGIFGNSLVIVIYKTKMKSKKDDRYFIPALAVID
FMGSAFASTFSLVQNVRPVMFPGSFSCKFLNYGTSTFIIASLVLLLIISIQRYQKICRPFGFQMSMSVKRLAIFLTFLIG
NILSIPVTILYQTVGIRNQHFNGTGTTCGNAPGMERFGDIYRGIIIFAEVLAIICMSFLYVLVGRKLFKQFSLSRKLKQT
ARVDIARKEILNNNASDDINTSKEEIIESSLEEEQQQNTERVNRIVPKETPRRPPRRNFSNVSTTTYTGRQNSCTSSVGY
ENRPFSHSARRYSLMFMVISLVAILCFIPPWILILLESKNDYFWNNLSYSAAQACSVIRRLYIVNHIANPFIYGFFDSKF
RHEIKRILCRCLK

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