Gene
| Gene Model ID | pfu_aug2.0_16234.1_16567 |
|---|---|
| Locus | scaffold16234.1 : 1 ... 2097 : - |
| To GenomeBrowser | scaffold16234.1:1..2097 |
| Genes list of scaffold | scaffold16234.1 |
| Synonym | pfu_aug1.0_5244.1_30912 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase hecw2-like | GO:0004842 GO:0016567 GO:0016874 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_16234.1_16567.t1 | 1 | 1 | HECT | 51 | 120 | 3.7e-12 | 46.0 | 3.2e-16 | 4.8e-12 | 45.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_16234.1_16567.t1 | gi|602670015|ref|XP_007440539.1| | PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Python bivittatus] | 0.0 |
| pfu_aug2.0_16234.1_16567.t1 | gi|297264590|ref|XP_002808063.1| | PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HECW2-like [Macaca mulatta] | 0.0 |
| pfu_aug2.0_16234.1_16567.t1 | gi|470634456|ref|XP_004322786.1| | PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Tursiops truncatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_16234.1_16567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16234.1_16567.t1 gttgatggtaagaagggaccatgtattagaagatgcctttaataagataatgggacagtccaagagagagctacagaaaa gtaaactctacatcacctttgttggagaagaagggttagactatgggggaccatccagggagttctttttcttactatct cgggagttgtttaatccgtactatggtctgtttgagtactccgctaacgatacgtataccgtacaaatatctccgatgtc tactatagtggaagactttcatgaatggtttcgttttgccggtagagtcctaggattggcagtggtccatcagtatttac tggatgcctttttcacacgacctttctacaaagctttactaagaat |
|
Protein
| Protein ID | pfu_aug2.0_16234.1_16567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_16234.1_16567.t1 LMVRRDHVLEDAFNKIMGQSKRELQKSKLYITFVGEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQISPMS TIVEDFHEWFRFAGRVLGLAVVHQYLLDAFFTRPFYKALLR |
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