Gene
| Gene Model ID | pfu_aug2.0_1626.1_21718 |
|---|---|
| Locus | scaffold1626.1 : 1 ... 55908 : + |
| To GenomeBrowser | scaffold1626.1:1..55908 |
| Genes list of scaffold | scaffold1626.1 |
| Synonym | pfu_aug1.0_8342.1_45844 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| e3 ubiquitin-protein ligase ubr2-like | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1626.1_21718.t1 | 2 | 1 | zf-UBR | 191 | 259 | 4.1e-20 | 71.2 | 1.4e-23 | 4.1e-20 | 71.2 |
| pfu_aug2.0_1626.1_21718.t1 | 1 | 1 | ClpS | 319 | 364 | 4.8e-11 | 42.2 | 5.4e-14 | 1.6e-10 | 40.5 |
| pfu_aug2.0_1626.1_21718.t1 | 2 | 2 | zf-UBR | 1813 | 1837 | 4.1e-20 | 71.2 | 5.0 | 15000.0 | -5.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1626.1_21718.t1 | gi|585657207|ref|XP_006815804.1| | PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1626.1_21718.t1 | gi|524901501|ref|XP_005107157.1| | PREDICTED: E3 ubiquitin-protein ligase UBR2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1626.1_21718.t1 | gi|524901499|ref|XP_005107156.1| | PREDICTED: E3 ubiquitin-protein ligase UBR2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1626.1_21718.t1 | gi|676451793|ref|XP_009052822.1| | hypothetical protein LOTGIDRAFT_115669, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1626.1_21718.t1 | gi|597767200|ref|XP_007247459.1| | PREDICTED: E3 ubiquitin-protein ligase UBR2 isoform X2 [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1626.1_21718.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1626.1_21718.t1 gagagagggaagtagttagacaggacatccaatattcagatatttgtggtctgacctacttcagcgtcgaagtaggacat catgtgaccgtcatactgcgacgtcatcaattggctgaaactggtacgaggcgtgataaaatctacaagattctaaaaca acaactagctaaccgtggtttgttgtccagtaattcccagagtcgcatgaaccaatcaaatcatcaccgagtggaattac tggacaacaaaccacagctagctagttccagttcactaagctccgcctattcacgtgctatagaactcgtaacaatttta agtttgttggggattttacaccaggagagttctatggagtggcttgcacattgtggtaaaggagacctgctagtgtcgtt gaaaaaacactggaaaacgtttgtcttgtgtgtatacggaaacaatcatgatccaacaaaagaggaaagactggctcaga agtttctgtttagaccgatggaatacttcctatgtaatggtgacccagatactgtattcaaacagctcaaagacttggat tcaccgtccgccatttgtggaagagtgttcaagactggggaaccaacatattcctgcagggattgtgccaatgatccaac atgtgtattatgtatagactgcttccagaggagtgctcacaaaaaacatcgctacaggatgagtacctcgggaggtgggg gttactgtgattgtggggacaccgaggcgtggacgtcacacccattctgcgatgctcaccgtcctaaccaaggagacacc agtgaggagtccaacattatagaggccctgcctgacgacctgacagatcgagccagcgcgctatttatggccactctgaa gtacgctgtggagatgctcgtttgggaccagtgtgattcgctgccccacgatttacacccggacggagaacttcatgata cttacgtcaccatgctgttcaatgacgaggttcatacgtatgaacaggtaattgtgatcagtaccctacagagagccgtc gattgttcacataaaaaagctatagagtatgctaccactgtagacagagagggtctgaaattcccagtcaatgaaggaaa attggcctttgataggtcagagaaaagtccaaccttcaaacgagcatgtttcatgctttatgatttgaagtatgccttaa tctgcaagccctcaccagaggattggtgtgataaactcagggaaaactttctacgtggcctcaagtcctttctacacctt ctaaaaatgatgcagggtatggattctgtgatacgacagacagggatgcatctagaatacgaaccagaatgggagggtgc ctttaacctacagctcaaacaggatgatgtcatagcagaattcctagaatggtgtggaacagatcgtgaggtgttgattg aagcatacaagatcacgttagagttattacttcagtgtaaggacaagcctgccacagtcaaaagggaggacaaaacaggt ctgtatgtatatatggagaagttcggattgtctttcaactgtgatgcactccagtcacagttgccagagttcagtctcat cagctccttatggctggattttgaggatacttttggttttaagaatctcttttgtctttacagtgttctcatggatcagg aatgtaaaaaacaatttgctgtcctcttcacaaagcattatggacgtgtgatgcatgactttgctcgagacgatcacgat catgaagtttgtgttgcgtccctcactgtacaaatttttacagtaccaagtctgcactatgcgatgctagttaaggactt tgtgcaggacgaccattatcgccccgtttccatcacgtcccattctgttcaaattttcacagtaggaactttggctcgga tgttggttatggaacatgatctcctgaacataattatgacagcattcttagaggcatgtgaagaaaagaaaaacaatgaa ggaaaattggcctttgataggtcagagaaaagtcctaccttcaaacgagcatgtttcatgctttatgatttgaagtatgc cttaatctgtaagccctcaccagaggattggtgcgataaactcagggaaaattttcttcgtggcctcaagtcctttctac accttctaaaaatgatgcagggtatggattctgtgatacgacagacagggatgcatctagaatacgaaccagaatgggag ggtgcctttaacctacagctcaaacaggatgatgtcatagcagaattcctggaatggtgtggaacagatcgtgaggtgtt gattgaagcctacaagatcacgttagagttattacttcagtgtaaggacaagcccgccacagtcaaaagggaggacaaaa caggtctgtatgtatatatggagaagttcggattgtctttcaactgtgatgcactccagtcacaggcagtggatccagtg gagttgatggagccaccactcagggtacaggtgatgatagctcaaacacaagctggtatgtggaggagaaatggctatgc cttgctcatccagatattcttttaccacaatgtgaagtgccgtagggagatgtttgacaaagatattgtcatgcttcaga tttgtgcagctgtgatagatagtaacgagttcttgattcatctccttaacaagttcaacctcctatcttgggtcaaagta gagtatgatacaccatcaggtcaagacgacttggttcgacaaaccatcacgttagccgaggaattcctcaatctactgat cattctcataggtgagagatatgtacctggtataggtcaagtctccaatcaggatgtcgtcaagagggagataatccatc agctctgtatatcacctatggctcacagtgaattatcaaaaggattgccggaggatagtaatcatgagactggtatagag tctgtaataaatgaggtggcagaattcaggttgcatagtaacatgttttacatgtatcttgcacaggcagaggaagccca gctgaaaaggaaaaaggaggaaactcctcctaatcaagcattacctccccctgtgcctccgttatttacttctctgttcc atccaatcgtaaacctcctacagtctgacatcatgctggtcatcatgcacctcatcctacagcgtagtgtggccgcgagg tcaaggtcatggtcagaagctcagctcgaccgagtgttacatctgattggattggcgttacatgaacaaaaaactgcagt catgtccgggaatcccactttcgactttataagtaaagcagtcagaggtgatagaaatttagtggtattacttgagtcgc tagtgtcggatcacaacaatatttctcatgactcgactaaggatttactcacctgggttcttaagctatttgtggaggtc aggaagatgaccaatgcatcaagctccatggaaaccttggatcagatttccatggcaaccaaacaagaaagtgagaaagc caagaaaaagaaggcgagactggctgccaaacgacgagaaaaaatcatggctcagatctcaaacatgcagaaaaatttca tcaaggacaatgcagagttgtttgagagtactgattctgagacgaacttggtgcatgcgtcctcagatatggatgtaagt gaagaacaaagcatagagtttcctgtgtctgtagggagacataaaaatccctccattagttttggtatcaccaaggcaac gtgtatactgtgtcaagaacaacaagatgtcactacggcaggaaggtgtatggttctggccggatttgttcaaagatcta ctgtgatgtcacagtgtcggagcagagtcatgacagacggagagaatcatgatccactactgtcaccagccgatctgaat acgggcgtgttcacaagctcatgtggtcataccatgcactcagattgttggcaaagattttttgatgcaatattagccaa ggagagaagacggcccatcaggatacgtgctacactcagctataatatagatcagctggagtttctatgtccactctgtg agagtctgagcaatactgtgataccattagtacctcccatacatacgatagtgggtgaacgagaaaagaaagaaggtgat gtcagttttaatgattggttagatggattacacaaaacagtgcaaaactcaattaaagaaagggagaaagaagccaagtc taaagaatctggagaagatgactcctttgtgttcaccccttcttccatctcctctataaccagaatgatggcgggaaacg tcgctaagaactttcatctcctctggcattacgtctacgatgatgcaagagaaaagaaagaaggtgatgtcagttttaac gattggttagatggtttacacaaaacagttcaaaactcaattaaagaaagggagaaagaagccaagtctaaagaatctgg agaagatgattcctttgtgttcaccccttcctccatctcgtctataaccagaatgatggcaggaaacgttgctaagaact ttcatctcctctggcattatgtctatgatgatgcaaggggaggtcatttttctgaaagtgttcgtgatatgctgagaaaa tttgcaaaagatgtatactcagtaagtaacatgtctactacattgatttctgcaaaatttgtgagattaccagaaatagt atcacaagccctgaaaatggcaaagtttggcctgggtgttctagcggatgacgctaatcagagggtgcctataatggcat ggaatacctgcacctatacaatacaaaatatcgagcaattactgagattagagaacaagcctttgtttggagttttaccg gcccggacgttagactgtatcaatgctctagtcaagtttgccaccgtgtcgggtcagatcactcctgtagatgtgatgaa gaagcactgtctgcgattattgtcaggttacatggaggtggaacatgaagaagatgctagtcgtttgctcaaaatctacg tcagcgttagacagaaagctggtcttgacaacagtagattaccatcaccatggcaactagcccactacataaaggaggcg tgtctaccgtttctgagatgttctaccattctgtatcaccatcttactggtgtaccagtaccgccttcattttatgaaac catagtaaccgacattgatccctactgtagatacctagcgatacccacagagctttcaaaactatttataggccaaggag aagtcatggatacactgtttgacttatggtgtagcagtccgttggtgaaggagaggttctcagccagtagtcagaccttg gtcaggtatcctcgactcatcaacaaactcatagacttacctgacgattatagtgaactcatcaatcaagtctctacttt tacatgtccgaaatctaacggagacgacagtcgagccccgaccatgtgtttagtatgcggctctatgctctgttctcaga gctactgttgtcagacggagatagagagcgagaaagtcggagccgctacggagcataccttcaaatgtggagccggtata ggaatattcctacgagttattgattcaaaacttggggaacaaagccccctctaa |
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Protein
| Protein ID | pfu_aug2.0_1626.1_21718.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1626.1_21718.t1 EREVVRQDIQYSDICGLTYFSVEVGHHVTVILRRHQLAETGTRRDKIYKILKQQLANRGLLSSNSQSRMNQSNHHRVELL DNKPQLASSSSLSSAYSRAIELVTILSLLGILHQESSMEWLAHCGKGDLLVSLKKHWKTFVLCVYGNNHDPTKEERLAQK FLFRPMEYFLCNGDPDTVFKQLKDLDSPSAICGRVFKTGEPTYSCRDCANDPTCVLCIDCFQRSAHKKHRYRMSTSGGGG YCDCGDTEAWTSHPFCDAHRPNQGDTSEESNIIEALPDDLTDRASALFMATLKYAVEMLVWDQCDSLPHDLHPDGELHDT YVTMLFNDEVHTYEQVIVISTLQRAVDCSHKKAIEYATTVDREGLKFPVNEGKLAFDRSEKSPTFKRACFMLYDLKYALI CKPSPEDWCDKLRENFLRGLKSFLHLLKMMQGMDSVIRQTGMHLEYEPEWEGAFNLQLKQDDVIAEFLEWCGTDREVLIE AYKITLELLLQCKDKPATVKREDKTGLYVYMEKFGLSFNCDALQSQLPEFSLISSLWLDFEDTFGFKNLFCLYSVLMDQE CKKQFAVLFTKHYGRVMHDFARDDHDHEVCVASLTVQIFTVPSLHYAMLVKDFVQDDHYRPVSITSHSVQIFTVGTLARM LVMEHDLLNIIMTAFLEACEEKKNNEGKLAFDRSEKSPTFKRACFMLYDLKYALICKPSPEDWCDKLRENFLRGLKSFLH LLKMMQGMDSVIRQTGMHLEYEPEWEGAFNLQLKQDDVIAEFLEWCGTDREVLIEAYKITLELLLQCKDKPATVKREDKT GLYVYMEKFGLSFNCDALQSQAVDPVELMEPPLRVQVMIAQTQAGMWRRNGYALLIQIFFYHNVKCRREMFDKDIVMLQI CAAVIDSNEFLIHLLNKFNLLSWVKVEYDTPSGQDDLVRQTITLAEEFLNLLIILIGERYVPGIGQVSNQDVVKREIIHQ LCISPMAHSELSKGLPEDSNHETGIESVINEVAEFRLHSNMFYMYLAQAEEAQLKRKKEETPPNQALPPPVPPLFTSLFH PIVNLLQSDIMLVIMHLILQRSVAARSRSWSEAQLDRVLHLIGLALHEQKTAVMSGNPTFDFISKAVRGDRNLVVLLESL VSDHNNISHDSTKDLLTWVLKLFVEVRKMTNASSSMETLDQISMATKQESEKAKKKKARLAAKRREKIMAQISNMQKNFI KDNAELFESTDSETNLVHASSDMDVSEEQSIEFPVSVGRHKNPSISFGITKATCILCQEQQDVTTAGRCMVLAGFVQRST VMSQCRSRVMTDGENHDPLLSPADLNTGVFTSSCGHTMHSDCWQRFFDAILAKERRRPIRIRATLSYNIDQLEFLCPLCE SLSNTVIPLVPPIHTIVGEREKKEGDVSFNDWLDGLHKTVQNSIKEREKEAKSKESGEDDSFVFTPSSISSITRMMAGNV AKNFHLLWHYVYDDAREKKEGDVSFNDWLDGLHKTVQNSIKEREKEAKSKESGEDDSFVFTPSSISSITRMMAGNVAKNF HLLWHYVYDDARGGHFSESVRDMLRKFAKDVYSVSNMSTTLISAKFVRLPEIVSQALKMAKFGLGVLADDANQRVPIMAW NTCTYTIQNIEQLLRLENKPLFGVLPARTLDCINALVKFATVSGQITPVDVMKKHCLRLLSGYMEVEHEEDASRLLKIYV SVRQKAGLDNSRLPSPWQLAHYIKEACLPFLRCSTILYHHLTGVPVPPSFYETIVTDIDPYCRYLAIPTELSKLFIGQGE VMDTLFDLWCSSPLVKERFSASSQTLVRYPRLINKLIDLPDDYSELINQVSTFTCPKSNGDDSRAPTMCLVCGSMLCSQS YCCQTEIESEKVGAATEHTFKCGAGIGIFLRVIDSKLGEQSPL |
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