Gene
| Gene Model ID | pfu_aug2.0_1626.1_21721 |
|---|---|
| Locus | scaffold1626.1 : 69736 ... 104767 : + |
| To GenomeBrowser | scaffold1626.1:69736..104767 |
| Genes list of scaffold | scaffold1626.1 |
| Synonym | pfu_aug1.0_29120.1_69903 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| striatin isoform x4 | GO:0005515 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1626.1_21721.t1 | 2 | 1 | Striatin | 118 | 252 | 1.68156e-44 | 151.3 | 0.0 | 1.68156e-44 | 151.3 |
| pfu_aug2.0_1626.1_21721.t1 | 2 | 2 | Striatin | 378 | 440 | 1.68156e-44 | 151.3 | 0.17 | 520.0 | 0.9 |
| pfu_aug2.0_1626.1_21721.t1 | 6 | 1 | WD40 | 520 | 558 | 5.9e-40 | 133.7 | 3.6e-13 | 1.1e-09 | 37.8 |
| pfu_aug2.0_1626.1_21721.t1 | 6 | 2 | WD40 | 574 | 611 | 5.9e-40 | 133.7 | 9.7e-12 | 2.9e-08 | 33.2 |
| pfu_aug2.0_1626.1_21721.t1 | 6 | 3 | WD40 | 673 | 701 | 5.9e-40 | 133.7 | 0.0036 | 11.0 | 6.1 |
| pfu_aug2.0_1626.1_21721.t1 | 6 | 4 | WD40 | 706 | 743 | 5.9e-40 | 133.7 | 1.7e-12 | 4.9e-09 | 35.7 |
| pfu_aug2.0_1626.1_21721.t1 | 6 | 5 | WD40 | 748 | 757 | 5.9e-40 | 133.7 | 5.0 | 15000.0 | -4.1 |
| pfu_aug2.0_1626.1_21721.t1 | 6 | 6 | WD40 | 763 | 788 | 5.9e-40 | 133.7 | 1.4e-06 | 0.004 | 16.9 |
Transcript
| Transcript ID | pfu_aug2.0_1626.1_21721.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1626.1_21721.t1 atgcgagctcagcaaaaattttggtcgcctcgggcgtcaggatagcatactgctttcgcaacagtatggaccgtgacaca gaccgaaagtgagtgtagatgtagtcagtacagtgtacatgcagcacacaaaagtagagaagagggaggagccatatata gaggaggtggacagggtacggagggaggggcagcgccatctgccctaaataaaaattgtaatggctaccgaaagaaaatg ttagaagagggtcctggttctcattcaggagggcagctgggcccagtgtcaggggcgatcggaatgatgacaaaacaaca gggggacgattcttccccaagaccacagtactcaatgccggggattttgcatttcttgcagacggaatgggcccgcttcg aaatggaacgatctcagtgggaagttgaacgggccgagcttcaagctagaattgcttttttgaaaggagagaggaaagga caggaaaacctaaaacaggacttggtcagaagaataaagatgttggaatttgctttaaaacaagaaagagccaaatatca caaactgaaatatggtacagacctgaaccaagaggatttaaaaccgcccatattggataagaaagatggagctgaagagc ctgtagatggtgaagttttaccctcaaacagtaacacatggcgtcaaggtcggcatttactccgacaatacttacaagaa ataggttatactgacacaatcatagacgtacgatcagcgagagtgaggtctttactcggcctccagagtcatgtagcgga aagtgaggcagatgcggctcagtctgccctcgtacaaatgaatggtgacatatcaggaaaacgagcacccgaccagggaa aagccagtaccggcaagaaggtgccagcttctctcgtcgacagtgcattgttggacagtgaagcgtctgtacttgctacc ctcgattttcttggcccagatggtgttgatgatgaggaggaaaatttaagtgacgaggaggatggattgaatatagatga agaagccgaaatgaaacttgtcaaaaagatgccaaaagttaaaaatgtagatgagaaaaaagatagcgatgagtggagcg tggaccaacagctcatagctaaacttaaagaccagtacaaaaaagagaggaaagggaaaaaatcaaggccaaaccgatca acactgcaagctatgcttgctaatttgggtgacgatgacgacacaccttcttcttcttcttcctcgaatcaagctggtgc agcgtctggtagtcccacgcgaaattcctcgacggaaaatagcatgtcagaagtagatgaatccggtgtacaaggatcga ttacgttttcgtcgtcagaatccaagaggaatgttatgggtgtgtctggacccgacgatgaagcaatagaagctgcatta ggacttggcggacttggagaactagccgatctgacagtttccaatgaagcagaccctctaacttacgatatttttggaat gacgatttcagccccaaaagaagtttttagaaagacatggaatgctaaatatactctacgcagtcattttgacggagtgc ggtcgttagcgttccatcctgtagaaccggtacttataacggcttcagaagatcacacactcaaactatggaatcttcaa aaaacagtcccagctaaaaaagcggcgtccttggacgtagaacccgtgtacacgttcagagctcacatcggccctgtttt atgtttggccgtcagtgcttcaggtgaacagtgctatagcgggggaatcgattctacaatacgatgctggaatataccca attcaaatatagatccttatgattcatttgagaaaggcgtgccaagttctgtcgactttgtaacctgtgatcccagccag atggtggcatcttatacgtcctccaatgcttacatatttgatctagaaacaggaaaacaaataacagctttagaatccaa ttttacaagtgaaggaaagaatcaaattaattgtgtagtcaatcatccaacacttcccgttagtatagcagcgtatgaag acagacatataagattctttgataatagtacaggaaaaatgattcattcaatggtagcccatttagaagctgtgaccagt ttagctgtagatcccaatggtttatatttactttcaggaagtcatgattgttcaattaggttatggaacttggacagtaa aacatgtgtacaagaaattactgcacatagaaagaaatttgacgaatcaatacatgcagtggctttccatccttcaaaac cttacatagcgagtgcaggggccgacgccttagccaaagtcttcgtatga |
|
Protein
| Protein ID | pfu_aug2.0_1626.1_21721.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1626.1_21721.t1 MRAQQKFWSPRASGXHTAFATVWTVTQTESECRCSQYSVHAAHKSREEGGAIYRGGGQGTEGGAAPSALNKNCNGYRKKM LEEGPGSHSGGQLGPVSGAIGMMTKQQGDDSSPRPQYSMPGILHFLQTEWARFEMERSQWEVERAELQARIAFLKGERKG QENLKQDLVRRIKMLEFALKQERAKYHKLKYGTDLNQEDLKPPILDKKDGAEEPVDGEVLPSNSNTWRQGRHLLRQYLQE IGYTDTIIDVRSARVRSLLGLQSHVAESEADAAQSALVQMNGDISGKRAPDQGKASTGKKVPASLVDSALLDSEASVLAT LDFLGPDGVDDEEENLSDEEDGLNIDEEAEMKLVKKMPKVKNVDEKKDSDEWSVDQQLIAKLKDQYKKERKGKKSRPNRS TLQAMLANLGDDDDTPSSSSSSNQAGAASGSPTRNSSTENSMSEVDESGVQGSITFSSSESKRNVMGVSGPDDEAIEAAL GLGGLGELADLTVSNEADPLTYDIFGMTISAPKEVFRKTWNAKYTLRSHFDGVRSLAFHPVEPVLITASEDHTLKLWNLQ KTVPAKKAASLDVEPVYTFRAHIGPVLCLAVSASGEQCYSGGIDSTIRCWNIPNSNIDPYDSFEKGVPSSVDFVTCDPSQ MVASYTSSNAYIFDLETGKQITALESNFTSEGKNQINCVVNHPTLPVSIAAYEDRHIRFFDNSTGKMIHSMVAHLEAVTS LAVDPNGLYLLSGSHDCSIRLWNLDSKTCVQEITAHRKKFDESIHAVAFHPSKPYIASAGADALAKVFV |
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