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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1626.1_21723
Locus scaffold1626.1 : 132256 ... 137837 : +
To GenomeBrowser scaffold1626.1:132256..137837
Genes list of scaffold scaffold1626.1
Synonym pfu_aug1.0_10535.1_02937

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1626.1_21723.t1 1 1 Galactosyl_T 108 293 1.3e-38 132.6 3.50044e-42 1.7e-38 132.1

Transcript
Transcript IDpfu_aug2.0_1626.1_21723.t1
Definition-
>pfu_aug2.0_1626.1_21723.t1
atgttcctattgtcacaaaaagatgtgtattataccaaacacgaagaagacactattccgccaagccggtacatgtatac
gcctctaccaaataccacgtggatacatttcaatgacacggactttcgttatcccattgatactaacatgaccgaattag
cttatcgcatattgaggaatgagacaactgatatcagtattataaatccacatccgttccgatatattcataatccagag
tcaatgtgttcatcaaagagaacaaatagtcatctgcccctcctgattcttatcaagtcttcggtacctcatttcgactt
acggaatgcaatacgcagaacttgggggagaaaactgaagaaatctccaaaatacgaaatggcattcctcttaggatatt
tgaatcaccatcaacatttgattgataacgagcattacaaaaatggagatataattcaggaagattttatagacgcctat
tggaataatacgtataaaacaatcatggcctacaattgggctgtggagtactgctctattgcacacaccgtcttgttcct
cgacgacgatatgttcataaatcctgacaacttggatatatatgtgtctgaaatagagggaaaagaggaagaagatgtat
attcaggtgtattactagaaatactaacaccaatacgtgacatcaagtcaaaatgggctgtacaatatcaggaatatccg
tatgattcatatccaagatttttagccgggtccgtcatgtttgtgcccatgtcaatagtaaagatatttaagactatttt
tccgtatgtaaaataccttaaacttgatgatgtttatcttggtattgtagcccataaattgaatattcaaccaaaagaga
cgccacatttagacaatgccaatttgagaaatttcagaaatctgtcaattcttattgcaaatcatggatttaaggacagt
aatctatatatcaaaacatactttgaattgttcgatcacaatgcttga

Protein
Protein IDpfu_aug2.0_1626.1_21723.t1
Definition-
>pfu_aug2.0_1626.1_21723.t1
MFLLSQKDVYYTKHEEDTIPPSRYMYTPLPNTTWIHFNDTDFRYPIDTNMTELAYRILRNETTDISIINPHPFRYIHNPE
SMCSSKRTNSHLPLLILIKSSVPHFDLRNAIRRTWGRKLKKSPKYEMAFLLGYLNHHQHLIDNEHYKNGDIIQEDFIDAY
WNNTYKTIMAYNWAVEYCSIAHTVLFLDDDMFINPDNLDIYVSEIEGKEEEDVYSGVLLEILTPIRDIKSKWAVQYQEYP
YDSYPRFLAGSVMFVPMSIVKIFKTIFPYVKYLKLDDVYLGIVAHKLNIQPKETPHLDNANLRNFRNLSILIANHGFKDS
NLYIKTYFELFDHNA

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