Gene
| Gene Model ID | pfu_aug2.0_1629.1_31803 |
|---|---|
| Locus | scaffold1629.1 : 50584 ... 65505 : - |
| To GenomeBrowser | scaffold1629.1:50584..65505 |
| Genes list of scaffold | scaffold1629.1 |
| Synonym | pfu_aug1.0_50581.1_20085 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1629.1_31803.t1 | 1 | 1 | Fumble | 29 | 363 | 0.0 | 434.2 | 0.0 | 0.0 | 433.8 |
| pfu_aug2.0_1629.1_31803.t1 | 2 | 1 | DUF89 | 451 | 487 | 1.54143e-44 | 152.1 | 0.41 | 3100.0 | -3.4 |
| pfu_aug2.0_1629.1_31803.t1 | 2 | 2 | DUF89 | 499 | 732 | 1.54143e-44 | 152.1 | 0.0 | 2.38221e-44 | 151.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1629.1_31803.t1 | gi|556979618|ref|XP_005996661.1| | PREDICTED: pantothenate kinase 4 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1629.1_31803.t1 | gi|511898467|ref|XP_004768800.1| | PREDICTED: pantothenate kinase 4 [Mustela putorius furo] | 0.0 |
| pfu_aug2.0_1629.1_31803.t1 | gi|742148405|ref|XP_010880003.1| | PREDICTED: pantothenate kinase 4 isoform X4 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1629.1_31803.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1629.1_31803.t1 atggcatcagcccactgtagctatgctaggagcatagagctctccagtgagcaggtcttcaggaacatgaagaatgcaag atgcctagcattggatatcggaggttccttggcaaaacttgcgtattgctcaagaattcagaggaggatgtctcaggtgt ttgactgtcatgaaaagaaggtagatggcagcactggtatttatgaggttgcagaaggtgatgagtatataagccgttta cattttgtcaaatttgaaaccaaatttatcgagagatgtctggactttatagaagaaaatctgaaggagtccttgaaaaa ggacaaggtcattcatgtcacagggggaggggctcacaaatacaaagaactactatcttctaaattacaagtaagagtcg agagagaggatgaaatgatctgtctcatagaaggttgtaattttttgctcaaaaacattgctgacgaagcctttgtttac caacggcatggccagccggaatataaattccagggagtagatccgaacatatttccatatttactggtcagtatcggatc tggtgtcagtctagtcaaggtagaaggagaagacaagtatgagcgtattggcgggacatcaacagggggaggaactttct ggggattaggctcattacttacaaaagctgaaacatttgatgagttgttggggttggctgagaagggcgaccatcgtgat gtggacatgctagtcaaggacatttacggaggagactacgcatcgattggtctgccgggagatatcattgccagcagctt cggaaaggctgccagatccccaaaggtttcagaaaaggcgtttaaggaggaggacatagcacgtagccttctgctgtcca tcagtaacgacatcggtcagatagcctatctacaagccaagttacacggactcaagaaaatctactttggcggattcttc atacgaggacatcccatcaccatgcatacaatcacgtacgccataaactattggtcaaagggtgagatccagcctttgtt tctcagacatgaaggatatctaggtgcaataggagctttcttgaaaggagcacaagagcaagagacaggtttctcatggg gagagtattatgcaggaagttcaggtctcagtagctcactcaacaatccttttttggataacaggaacaggagttcaacg tttgatatgttggaacttgatcgtctggagaaggccctgctgccctgtccactactactcgaccaccagagttacttccc agacacagtggacttaacacaggacgaggcggccagagaatactggctagactgctttgctaagggagtggataagacaa aacagcaagccataagaagtcaaccaaattctgtggacgtggaaaaacgagcagaaaacttcaaatcgaagtacttgaat aggttggaggaacttaagactaatccatgaattttaaacattatttttaccatgcagcaaaaacaaacagaaaatgaaca aagtttgaaatgcttgcccacctacttagatgacttagataaagaatcctgggaggacagacagctgacactggctaagg ggctccttgcagggaatgtgtttgattggggcgccagagaggtggcaaatattatggaaactcaggaatttggctttgat gaagcaaaaagcagacttcaagaaaggccatggttgattgatgactttgattcgtggatgaagcgactatcaacgggaaa tccccataaatgtgctgtgatatttgtagacaatagcggagctgatattatattgggtgtttttccatttgtacgggaat tactctctagaggcacaaaggtgatattatgtgcaaattcccgtccagctttaaatgatgttctatataatgaactggcc attctggtcaagagagtggctgaaatctgtgatacttttaggaaagctttagagacgtccagtctcatggtcaaggaatc tggacaggggtcaccatgtctagatctaaggctagttgactgtgaattagtgaagttgatggtagaagaagaagccgatt taattgtgatagaaggaatggggcgtgccgtgcatacaaacttcaatgccgccttttcttgtgaggtcctcaaagtcgct gtgataaaaaacaagtggttagcaaatagacttggtggagacatgtttagtgttatgttcaaatacgaggcatctcggaa agtgacagctagtaccagcgggaggttaaaagattag |
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Protein
| Protein ID | pfu_aug2.0_1629.1_31803.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1629.1_31803.t1 MASAHCSYARSIELSSEQVFRNMKNARCLALDIGGSLAKLAYCSRIQRRMSQVFDCHEKKVDGSTGIYEVAEGDEYISRL HFVKFETKFIERCLDFIEENLKESLKKDKVIHVTGGGAHKYKELLSSKLQVRVEREDEMICLIEGCNFLLKNIADEAFVY QRHGQPEYKFQGVDPNIFPYLLVSIGSGVSLVKVEGEDKYERIGGTSTGGGTFWGLGSLLTKAETFDELLGLAEKGDHRD VDMLVKDIYGGDYASIGLPGDIIASSFGKAARSPKVSEKAFKEEDIARSLLLSISNDIGQIAYLQAKLHGLKKIYFGGFF IRGHPITMHTITYAINYWSKGEIQPLFLRHEGYLGAIGAFLKGAQEQETGFSWGEYYAGSSGLSSSLNNPFLDNRNRSST FDMLELDRLEKALLPCPLLLDHQSYFPDTVDLTQDEAAREYWLDCFAKGVDKTKQQAIRSQPNSVDVEKRAENFKSKYLN RLEELKTNPXILNIIFTMQQKQTENEQSLKCLPTYLDDLDKESWEDRQLTLAKGLLAGNVFDWGAREVANIMETQEFGFD EAKSRLQERPWLIDDFDSWMKRLSTGNPHKCAVIFVDNSGADIILGVFPFVRELLSRGTKVILCANSRPALNDVLYNELA ILVKRVAEICDTFRKALETSSLMVKESGQGSPCLDLRLVDCELVKLMVEEEADLIVIEGMGRAVHTNFNAAFSCEVLKVA VIKNKWLANRLGGDMFSVMFKYEASRKVTASTSGRLKD |
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