Gene
| Gene Model ID | pfu_aug2.0_1634.1_15160 |
|---|---|
| Locus | scaffold1634.1 : 12387 ... 16085 : - |
| To GenomeBrowser | scaffold1634.1:12387..16085 |
| Genes list of scaffold | scaffold1634.1 |
| Synonym | pfu_aug1.0_23612.1_69572 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1634.1_15160.t2 | 1 | 1 | Cauli_VI | 52 | 94 | 1.6e-14 | 53.6 | 3.2e-17 | 3.7e-14 | 52.4 |
| pfu_aug2.0_1634.1_15160.t2 | 1 | 1 | RNase_H | 159 | 301 | 9.6e-21 | 74.4 | 3.0e-23 | 3.5e-20 | 72.7 |
| pfu_aug2.0_1634.1_15160.t2 | 2 | 1 | DUF1768 | 207 | 260 | 1.1e-25 | 90.2 | 2.8 | 3200.0 | -2.3 |
| pfu_aug2.0_1634.1_15160.t2 | 1 | 1 | PHD | 322 | 371 | 4.5e-07 | 29.4 | 1.0e-09 | 1.1e-06 | 28.1 |
| pfu_aug2.0_1634.1_15160.t2 | 2 | 2 | DUF1768 | 595 | 709 | 1.1e-25 | 90.2 | 9.5e-29 | 1.1e-25 | 90.2 |
| pfu_aug2.0_1634.1_15160.t2 | 1 | 1 | Lipase_GDSL_2 | 725 | 855 | 2.6e-07 | 30.9 | 4.7e-10 | 5.3e-07 | 29.9 |
| pfu_aug2.0_1634.1_15160.t2 | 1 | 1 | Lipase_GDSL | 747 | 857 | 5.8e-07 | 29.5 | 1.5e-09 | 1.7e-06 | 28.0 |
Transcript
| Transcript ID | pfu_aug2.0_1634.1_15160.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1634.1_15160.t1 atgatcaaaatgaccaaggataagaaaaatacggataaaaactactatgcagtgacaaaaggtagaaactgtggaatatt taaacaatggagtcaagtgaaacctttagtggacaaatatccaggagccgcgttcaaaggtttcaacgaattacaggaag ccattaatttcatggtaatgggtggaattgaaatccacaatgtaatgttgtatgaagatacaacaactacaacaaatgct gataatgtcatggtttttgcggaaagaagcggaatttcgctgtcagtagaaacaaatcctgacaaagataccgatgaaat agcgtccgatagtgagacagaggagaaattcttggatgcctcagaagaacttgttgtttatattgatggttgttgtttga ataatgggaacacaaatagtgtaagcaaagctggtattggtgtgtactggggaccggatcacagacttaacgttagtgag ccgatatcaaatggaaagaagacaaacaacacagctgaacttctgtctgcaatcaaagcgttggaacaaatcgaagaaaa taaacttgccaatgtgatagttaagtctgatagtaaatacgtgactgatggaattacaaaatggatcctaaagtggaaat ctaacaactggtcaacaacaagtggatcagaagtggaaaacaaggatctgtggatgaaattggacgtacttaatgcagcg gtcaatccaagatgggaacacattggccgcgaatttaacgctcaagctgacaaactgtccaaagatggagccaacattga aactgcaatgaatgtactgcaagctggaacagagaagaatattgtatcgtcgtgcgttatttgcaacacagaatcaacga gggacgtactagtatgttcgtcttgtaataggaaagtgcactacaagtgtagcggtttgccaaattatcaagtggcagta tttagaaaatcgcaaagaaagtttacatgtgaaaaatgtgttgtggatgcagggaatgttacagcaggtgatgcgcgaag atcttgtggtgtagttcgcgatgaccccgcgttggaaccgacatctttacagtgtacgaatgtgcattctcagccagaaa tatccgaggaaattagtggcatgaagaaagaaatccaaagtgttaaatcctccttctcgtgtctagagtcagaattatta aaaatcgtttcacaattatgtagcgaaaatgtacaaatgaaggaaagagtgtgcgaggagaaattaaaagctgtggaaaa agaaaacatggaattaattgggaaagtgcagaagaatgaaaacagggagcaagatttgagaggtcaaatggaaaatcttc ttgacaagaatgcaaagctgagtgccgagtgcgaaaatttgcgtaaaaacatcgcaatgcgaaaagaatctgagaccgac atgaaggttttgctgaagcagaaagacgaaatgattgaagaattgcgtaataatcagaaatcgcatcatcaaatccacga aacggtaggaaatcaaggtgaagaattagaggatcagttgcgcgctaacgtaaccgttacaaacaggtttgaacctttgt catttcaaccgaaacatgcacatgctacttttgagaagaggcctgatgctgtttatgttaaaggatatagggaacctctg tcaaatttttaccgtatggaatttcaatggcagcagaacacctttaatagcttggagcaagcatttcaacacgagaaagc tcgtcgacatggtgaccacagaacagcgaagcgaattttggccgcgaaacacgcaggaatcgcaaacaagataggtcgag atgtacggattcatcctatgtgggaccgagaaaaggaaaagatcatgtaccagatgttatgggaaaaatcaaatcaaagc gaggaattccgtcatgaactcctgagaactgccgacaaagagatctatgaggagcttcccgacaaattttggggcacagg gcgtgatggtagttcactaatcaagaacctgcgaagtgataacttctcccgccatttccgcactgaggtttgcaaatcct acacgattccggaagcaaagaaaaccattcgaaactgcccaggagagagggacgtggttgtatatcagttactttcgaac gacatgaaaagcaaatcgggggatgaatgtttgtcagatctacgagaacttgttacactaacaaaggagttgcaaccacg tgcgaaaatcataatttcattaccacctaaccgaggggattctgtaacattgaaccatacaacaaacagtataaatgcca gtgtgaaatttacatattctagagacaatatggtgaccgtatgtgacaactcgaatctgtcttacagaggagaacccagc aggcggtacattagtagcgacggggtacatccgacacccgcgggagaaaaggtgttatttggaaacatccgcctggcaat ccaaagtgtcatcacatgttaa |
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| Transcript ID | pfu_aug2.0_1634.1_15160.t2 |
| Definition | - |
>pfu_aug2.0_1634.1_15160.t2 atgatgtgttgccttccataccatgagagtaagattttctcccgcgtggtccaactgctgacactggattccaaaacagc cactaagtgggactggctgctaccagtacagatgatcaaaatgaccaaggataagaaaaatacggataaaaactactatg cagtgacaaaaggtagaaactgtggaatatttaaacaatggagtcaagtgaaacctttagtggacaaatatccaggagcc gcgttcaaaggtttcaacgaattacaggaagccattaatttcatggtaatgggtggaattgaaatccacaatgtaatgtt gtatgaagatacaacaactacaacaaatgctgataatgtcatggtttttgcggaaagaagcggaatttcgctgtcagtag aaacaaatcctgacaaagataccgatgaaatagcgtccgatagtgagacagaggagaaattcttggatgcctcagaagaa cttgttgtttatattgatggttgttgtttgaataatgggaacacaaatagtgtaagcaaagctggtattggtgtgtactg gggaccggatcacagacttaacgttagtgagccgatatcaaatggaaagaagacaaacaacacagctgaacttctgtctg caatcaaagcgttggaacaaatcgaagaaaataaacttgccaatgtgatagttaagtctgatagtaaatacgtgactgat ggaattacaaaatggatcctaaagtggaaatctaacaactggtcaacaacaagtggatcagaagtggaaaacaaggatct gtggatgaaattggacgtacttaatgcagcggtcaatccaagatgggaacacattggccgcgaatttaacgctcaagctg acaaactgtccaaagatggagccaacattgaaactgcaatgaatgtactgcaagctggaacagagaagaatattgtatcg tcgtgcgttatttgcaacacagaatcaacgagggacgtactagtatgttcgtcttgtaataggaaagtgcactacaagtg tagcggtttgccaaattatcaagtggcagtatttagaaaatcgcaaagaaagtttacatgtgaaaaatgtgttgtggatg cagggaatgttacagcaggtgatgcgcgaagatcttgtggtgtagttcgcgatgaccccgcgttggaaccgacatcttta cagtgtacgaatgtgcattctcagccagaaatatccgaggaaattagtggcatgaagaaagaaatccaaagtgttaaatc ctccttctcgtgtctagagtcagaattattaaaaatcgtttcacaattatgtagcgaaaatgtacaaatgaaggaaagag tgtgcgaggagaaattaaaagctgtggaaaaagaaaacatggaattaattgggaaagtgcagaagaatgaaaacagggag caagatttgagaggtcaaatggaaaatcttcttgacaagaatgcaaagctgagtgccgagtgcgaaaatttgcgtaaaaa catcgcaatgcgaaaagaatctgagaccgacatgaaggttttgctgaagcagaaagacgaaatgattgaagaattgcgta ataatcagaaatcgcatcatcaaatccacgaaacggtaggaaatcaaggtgaagaattagaggatcagttgcgcgctaac gtaaccgttacaaacaggtttgaacctttgtcatttcaaccgaaacatgcacatgctacttttgagaagaggcctgatgc tgtttatgttaaaggatatagggaacctctgtcaaatttttaccgtatggaatttcaatggcagcagaacacctttaata gcttggagcaagcatttcaacacgagaaagctcgtcgacatggtgaccacagaacagcgaagcgaattttggccgcgaaa cacgcaggaatcgcaaacaagataggtcgagatgtacggattcatcctatgtgggaccgagaaaaggaaaagatcatgta ccagatgttatgggaaaaatcaaatcaaagcgaggaattccgtcatgaactcctgagaactgccgacaaagagatctatg aggagcttcccgacaaattttggggcacagggcgtgatggtagttcactaatcaagaacctgcgaagtgataacttctcc cgccatttccgcactgaggtttgcaaatcctacacgattccggaagcaaagaaaaccattcgaaactgcccaggagagag ggacgtggttgtatatcagttactttcgaacgacatgaaaagcaaatcgggggatgaatgtttgtcagatctacgagaac ttgttacactaacaaaggagttgcaaccacgtgcgaaaatcataatttcattaccacctaaccgaggggattctgtaaca ttgaaccatacaacaaacagtataaatgccagtgtgaaatttacatattctagagacaatatggtgaccgtatgtgacaa ctcgaatctgtcttacagaggagaacccagcaggcggtacattagtagcgacggggtacatccgacacccgcgggagaaa aggtgttatttggaaacatccgcctggcaatccaaagtgtcatcacatgttaa |
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Protein
| Protein ID | pfu_aug2.0_1634.1_15160.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1634.1_15160.t1 MIKMTKDKKNTDKNYYAVTKGRNCGIFKQWSQVKPLVDKYPGAAFKGFNELQEAINFMVMGGIEIHNVMLYEDTTTTTNA DNVMVFAERSGISLSVETNPDKDTDEIASDSETEEKFLDASEELVVYIDGCCLNNGNTNSVSKAGIGVYWGPDHRLNVSE PISNGKKTNNTAELLSAIKALEQIEENKLANVIVKSDSKYVTDGITKWILKWKSNNWSTTSGSEVENKDLWMKLDVLNAA VNPRWEHIGREFNAQADKLSKDGANIETAMNVLQAGTEKNIVSSCVICNTESTRDVLVCSSCNRKVHYKCSGLPNYQVAV FRKSQRKFTCEKCVVDAGNVTAGDARRSCGVVRDDPALEPTSLQCTNVHSQPEISEEISGMKKEIQSVKSSFSCLESELL KIVSQLCSENVQMKERVCEEKLKAVEKENMELIGKVQKNENREQDLRGQMENLLDKNAKLSAECENLRKNIAMRKESETD MKVLLKQKDEMIEELRNNQKSHHQIHETVGNQGEELEDQLRANVTVTNRFEPLSFQPKHAHATFEKRPDAVYVKGYREPL SNFYRMEFQWQQNTFNSLEQAFQHEKARRHGDHRTAKRILAAKHAGIANKIGRDVRIHPMWDREKEKIMYQMLWEKSNQS EEFRHELLRTADKEIYEELPDKFWGTGRDGSSLIKNLRSDNFSRHFRTEVCKSYTIPEAKKTIRNCPGERDVVVYQLLSN DMKSKSGDECLSDLRELVTLTKELQPRAKIIISLPPNRGDSVTLNHTTNSINASVKFTYSRDNMVTVCDNSNLSYRGEPS RRYISSDGVHPTPAGEKVLFGNIRLAIQSVITC |
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| Protein ID | pfu_aug2.0_1634.1_15160.t2 |
| Definition | - |
>pfu_aug2.0_1634.1_15160.t2 MMCCLPYHESKIFSRVVQLLTLDSKTATKWDWLLPVQMIKMTKDKKNTDKNYYAVTKGRNCGIFKQWSQVKPLVDKYPGA AFKGFNELQEAINFMVMGGIEIHNVMLYEDTTTTTNADNVMVFAERSGISLSVETNPDKDTDEIASDSETEEKFLDASEE LVVYIDGCCLNNGNTNSVSKAGIGVYWGPDHRLNVSEPISNGKKTNNTAELLSAIKALEQIEENKLANVIVKSDSKYVTD GITKWILKWKSNNWSTTSGSEVENKDLWMKLDVLNAAVNPRWEHIGREFNAQADKLSKDGANIETAMNVLQAGTEKNIVS SCVICNTESTRDVLVCSSCNRKVHYKCSGLPNYQVAVFRKSQRKFTCEKCVVDAGNVTAGDARRSCGVVRDDPALEPTSL QCTNVHSQPEISEEISGMKKEIQSVKSSFSCLESELLKIVSQLCSENVQMKERVCEEKLKAVEKENMELIGKVQKNENRE QDLRGQMENLLDKNAKLSAECENLRKNIAMRKESETDMKVLLKQKDEMIEELRNNQKSHHQIHETVGNQGEELEDQLRAN VTVTNRFEPLSFQPKHAHATFEKRPDAVYVKGYREPLSNFYRMEFQWQQNTFNSLEQAFQHEKARRHGDHRTAKRILAAK HAGIANKIGRDVRIHPMWDREKEKIMYQMLWEKSNQSEEFRHELLRTADKEIYEELPDKFWGTGRDGSSLIKNLRSDNFS RHFRTEVCKSYTIPEAKKTIRNCPGERDVVVYQLLSNDMKSKSGDECLSDLRELVTLTKELQPRAKIIISLPPNRGDSVT LNHTTNSINASVKFTYSRDNMVTVCDNSNLSYRGEPSRRYISSDGVHPTPAGEKVLFGNIRLAIQSVITC |
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