Gene
| Gene Model ID | pfu_aug2.0_1634.1_15162 |
|---|---|
| Locus | scaffold1634.1 : 43146 ... 59239 : + |
| To GenomeBrowser | scaffold1634.1:43146..59239 |
| Genes list of scaffold | scaffold1634.1 |
| Synonym | pfu_aug1.0_20267.1_61987 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ral gtpase-activating protein subunit alpha-1-like | GO:0046982 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1634.1_15162.t1 | 1 | 1 | Rap_GAP | 601 | 775 | 0.0 | 188.1 | 0.0 | 0.0 | 187.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1634.1_15162.t1 | gi|524889861|ref|XP_005101482.1| | PREDICTED: ral GTPase-activating protein subunit alpha-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1634.1_15162.t1 | gi|27697179|gb|AAH42045.1| | GARNL1 protein, partial [Homo sapiens] | 0.0 |
| pfu_aug2.0_1634.1_15162.t1 | gi|2792496|gb|AAB97076.1| | tulip 2 [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_1634.1_15162.t1 | gi|632951871|ref|XP_007891536.1| | PREDICTED: ral GTPase-activating protein subunit alpha-1 isoform X4 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1634.1_15162.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1634.1_15162.t1 atgccactccctggatccactctccttatacgggatttcatcgtaggagctggtgctgtcatatcagctgtagatcttaa agagacccctcggacagaagccatggcagtattaggcagtatgatctgtttccccaaccactatcaggagttacctatct tagatcaatctgctttaacatcatatctctactgtaatgatttcaaggaaatgttgttgaaccacttactccgtgcaggg aaaaaggaaccagctggtctggctagatgtgtttccctgaatggtctaggactgtttttgtacgaggagctgactcataa cacactacaccccaaactgaatgaagcatttatagtattacttggagctctacgttgtacaaaccgtcaagtggccaagg tagcgtctgatgtattgggtatgctgtcagaccatacagatagactacttaattatcatccacaactacctaaacttatc attgaggttgtagcaggtactatagctatcatgataccccaaactggatcatcagcttctgaggaagagagaaagttgat agtatccatgatgttttgtatggtggaatggtgtatgaggatgcctgtctgtctgttactggagacctctgacacagaca gaagtacactgtttaaagtctttactgtactggatacttcagtaaagggccacactatggattctctgaacacggccaga caaagccttagtggtatgatccaggacggggactttgagtatctacgtgacatcagcagttcacatcgacgctccagctc cgactctatgttacagacgatgactgaccacttcagtgacaaacctaaacaggaggaaaaacactctatacatctggcag ctaaaacactgataaatcacctggtgaatcattactgtcatttccccatgggcgctggtgctgctcgattatcgagctcc atacaggaacatcatgatctagaggacccagtggaagaccttaaaccagaaatatttggtgccaccaatgtacagttttt tgtattgaacagaagaactctagtttctctcatagagcttcctgcattgttagacttgcctggtggtggagtgactgcag gcttgaccactgcccagacgatagctcgagtgatattgagagatctaacagggaagtattcctgggagagtgctgtacta tacgccccaccctggtgtcaacaaggatcatctactaactttattgttcatttgcttcagtttattggtaactctagtcc agaatgcctactgatccccggggagccactgaatatagaggcccctatccccgagggcctgagttccctgacggaagggg cactggaggaaatggttgtagaacagaaaggagcagaactggagtactacaacagtcataaacacaacaaaaaacacttg gagtttgtccatatgtcagcccagtcccagatgcctacagaggtccaggagactgtgtcaccgtttcagatgtgtcgtat gatgctggatcagatgggacttctagcttgggaaaaaagtatgtcagcccagtcccagatgcctacagaggtccaggaga ctgtgtcaccgtttcagatgtgtcgtatgatgctggatcagatgggacttctagcttgggaaaaaagatgtcactttgat ttgctaaagaaatctgacaagcttcttcgagaattaaaaaatctagataatcaaaagtgtcgtgagacccacaagtttgc tgtgatatatgtagcagagggtcaagaggataaaaactctatactatcaaactgcggaggcagtaaggcttttgaagact ttgtggctgggcttgggtgggagattgaactagaggtacatgaaggatttttgggaggtctacagcagaataaaaccaca ggtgacacggctccttactacgcaacctctctggtagaatgtatatttcacgtgtctacacgcatgccctcagggacgga tgaaggaaggcatatcaagatgcgacatttaggcaatgatgaggtacatatagtgtggtctgagcataccagggactaca gacgtggtatcatacctacagagtttggtgatgttctcatcattatatacccactacccagtggactgtacagaatacag attaatagaaaggcagaggttccgtattttggacctttgtttgatggtgcaatattagaccgtaaggtcttacccggtct agtcagggctacagccattaatgctagtcgtgttaaacgactctcgctgccatattatcattcattctatgaagaacgtg ccaagtgttttgagactgtcacacaacagcacatagactactcaatgtttgaagaatttgcttctaagatatttgccccg gtcttacctcaaaactcaacaatatgtgatcagaatacagagattccacccagctctagcagtagttctctggaccactc tcaatcatacgtggaacaagtgtcgccatctacaggccggcaaagcagaggtaggaaagtacaaatggcattgtggcaaa aggggcgcgatcacctaatattctactaa |
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Protein
| Protein ID | pfu_aug2.0_1634.1_15162.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1634.1_15162.t1 MPLPGSTLLIRDFIVGAGAVISAVDLKETPRTEAMAVLGSMICFPNHYQELPILDQSALTSYLYCNDFKEMLLNHLLRAG KKEPAGLARCVSLNGLGLFLYEELTHNTLHPKLNEAFIVLLGALRCTNRQVAKVASDVLGMLSDHTDRLLNYHPQLPKLI IEVVAGTIAIMIPQTGSSASEEERKLIVSMMFCMVEWCMRMPVCLLLETSDTDRSTLFKVFTVLDTSVKGHTMDSLNTAR QSLSGMIQDGDFEYLRDISSSHRRSSSDSMLQTMTDHFSDKPKQEEKHSIHLAAKTLINHLVNHYCHFPMGAGAARLSSS IQEHHDLEDPVEDLKPEIFGATNVQFFVLNRRTLVSLIELPALLDLPGGGVTAGLTTAQTIARVILRDLTGKYSWESAVL YAPPWCQQGSSTNFIVHLLQFIGNSSPECLLIPGEPLNIEAPIPEGLSSLTEGALEEMVVEQKGAELEYYNSHKHNKKHL EFVHMSAQSQMPTEVQETVSPFQMCRMMLDQMGLLAWEKSMSAQSQMPTEVQETVSPFQMCRMMLDQMGLLAWEKRCHFD LLKKSDKLLRELKNLDNQKCRETHKFAVIYVAEGQEDKNSILSNCGGSKAFEDFVAGLGWEIELEVHEGFLGGLQQNKTT GDTAPYYATSLVECIFHVSTRMPSGTDEGRHIKMRHLGNDEVHIVWSEHTRDYRRGIIPTEFGDVLIIIYPLPSGLYRIQ INRKAEVPYFGPLFDGAILDRKVLPGLVRATAINASRVKRLSLPYYHSFYEERAKCFETVTQQHIDYSMFEEFASKIFAP VLPQNSTICDQNTEIPPSSSSSSLDHSQSYVEQVSPSTGRQSRGRKVQMALWQKGRDHLIFY |
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