Gene
| Gene Model ID | pfu_aug2.0_164.1_13707 |
|---|---|
| Locus | scaffold164.1 : 1 ... 23545 : - |
| To GenomeBrowser | scaffold164.1:1..23545 |
| Genes list of scaffold | scaffold164.1 |
| Synonym | pfu_aug1.0_248.1_14934 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_164.1_13707.t1 | 4 | 1 | zf-B_box | 12 | 37 | 3.1e-06 | 26.9 | 2.6 | 3900.0 | -2.2 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 1 | zf-C3HC4 | 13 | 57 | 1.6e-07 | 30.8 | 1.1e-10 | 1.6e-07 | 30.8 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 2 | zf-B_box | 51 | 60 | 3.1e-06 | 26.9 | 1.8 | 2600.0 | -1.6 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 3 | zf-B_box | 105 | 140 | 3.1e-06 | 26.9 | 3.8e-06 | 0.0056 | 16.5 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 2 | zf-C3HC4 | 112 | 115 | 1.6e-07 | 30.8 | 10.0 | 15000.0 | -5.9 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 3 | zf-C3HC4 | 112 | 123 | 1.6e-07 | 30.8 | 2.6 | 3900.0 | -2.4 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 4 | zf-B_box | 156 | 186 | 3.1e-06 | 26.9 | 1.4e-08 | 2.1e-05 | 24.3 |
| pfu_aug2.0_164.1_13707.t1 | 4 | 4 | zf-C3HC4 | 176 | 183 | 1.6e-07 | 30.8 | 4.7 | 6900.0 | -3.2 |
Transcript
| Transcript ID | pfu_aug2.0_164.1_13707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13707.t1 atgagttcatctgagagccaaagaaatgtccttgtttgcgccttatgtaggaaacaatttgcagatcctaggtacttgct atgtcttcatacattttgtcgaaattgtattaaatcgaatgcaggaagagtgcgaaaaggaaattccaaagaatacccct gtcccttgtgtcaaagaaaaacacctatttcagacaagggagataaatggattgatgaacttccggtgaacgatttgata cttaacataataaatgcaaagaaactacaaaaaggagaagtaagttgtgtcccctgtagtcgcaaggggaaatctgtaaa agcaactagttggtgcaatgcatgtcgggaaggtatgtgtgacgaatgtaatgaggtgcataatacacttcagagtacca tgatacatgacactgtgaggatttcgcagctccggaaacggaccctacaggaagttgcaacgacgccattatgcgcggaa cacggtgaaaaattgacaaagttttgcaaagatcacgataaagctatatgcacatcctgtgctgcaaatagccatcgagc atgtaaagatgtattgacgatcgaagacatggcaaaggagagaaaagggatgtatagagatgtcaaaggcacacttgaaa agcagatgataaatgcaaatctcttggtcgaggatagaaatgatgcattctctttcttcgacaacacgagtctaaatacc agaagcgttattgaatccgtccgtaagaaacttaatgacgttttgataaaatgtgagaaaaaggcactgaaagatctaga cgacgtttgtgaaaaggaaaagtcggaatttcaaagtcagattgccgccactgaacatctagctgaagaaagtggaaatg ccctagctttggtggatactgctatgagagacgcaagtgacgtcgataaaatacaatggttagctacgaccacaccccag tgtgttgttcaagccgttgctacggaatggaaaaaagaggattttcccgacccccaagtggacctaggacggtgtgggag gaattgtcaaaggtcgtggatatgtgaccccaacaacgtccttactgacaattactacgcaaataggatagacaacttgc tcaaccgtatccgtggtaacggcatatgtggttgtcaaggagactgtattggacgtggctttaaaatgtcattagctcta gttaacagaatgaaattcgaaagttgggagactaaatccacaaaggataaggccagccgagccgcatacttcgctaccta cctacgatccacggcctggcatccacctaatacatgccaggatgacgtagttatcttcttgtcaagaggggatagacagg tgcggacatcagtgggacctagagctattgacgttataacatctagatgtgtaaaagatgtgtacgagaaagctaaacct gacctaacagcaggctactttgacaaggccatttattacatgatacaaagatacgagtaa |
|
Protein
| Protein ID | pfu_aug2.0_164.1_13707.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13707.t1 MSSSESQRNVLVCALCRKQFADPRYLLCLHTFCRNCIKSNAGRVRKGNSKEYPCPLCQRKTPISDKGDKWIDELPVNDLI LNIINAKKLQKGEVSCVPCSRKGKSVKATSWCNACREGMCDECNEVHNTLQSTMIHDTVRISQLRKRTLQEVATTPLCAE HGEKLTKFCKDHDKAICTSCAANSHRACKDVLTIEDMAKERKGMYRDVKGTLEKQMINANLLVEDRNDAFSFFDNTSLNT RSVIESVRKKLNDVLIKCEKKALKDLDDVCEKEKSEFQSQIAATEHLAEESGNALALVDTAMRDASDVDKIQWLATTTPQ CVVQAVATEWKKEDFPDPQVDLGRCGRNCQRSWICDPNNVLTDNYYANRIDNLLNRIRGNGICGCQGDCIGRGFKMSLAL VNRMKFESWETKSTKDKASRAAYFATYLRSTAWHPPNTCQDDVVIFLSRGDRQVRTSVGPRAIDVITSRCVKDVYEKAKP DLTAGYFDKAIYYMIQRYE |
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