Gene
| Gene Model ID | pfu_aug2.0_164.1_13710 |
|---|---|
| Locus | scaffold164.1 : 89809 ... 100425 : - |
| To GenomeBrowser | scaffold164.1:89809..100425 |
| Genes list of scaffold | scaffold164.1 |
| Synonym | pfu_aug1.0_38123.1_70258 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_164.1_13710.t1 | 2 | 1 | Methyltransf_31 | 40 | 53 | 3.6e-10 | 39.6 | 1.6 | 1600.0 | -1.5 |
| pfu_aug2.0_164.1_13710.t1 | 1 | 1 | Nol1_Nop2_Fmu | 148 | 322 | 1.1e-38 | 133.2 | 1.40004e-41 | 1.4e-38 | 132.9 |
| pfu_aug2.0_164.1_13710.t1 | 1 | 1 | FtsJ | 161 | 318 | 9.6e-07 | 28.9 | 1.7e-09 | 1.7e-06 | 28.1 |
| pfu_aug2.0_164.1_13710.t1 | 2 | 2 | Methyltransf_31 | 164 | 313 | 3.6e-10 | 39.6 | 1.2e-12 | 1.2e-09 | 37.9 |
| pfu_aug2.0_164.1_13710.t1 | 1 | 1 | Methyltransf_18 | 165 | 302 | 3.3e-08 | 34.0 | 7.0e-11 | 6.9e-08 | 33.0 |
| pfu_aug2.0_164.1_13710.t1 | 1 | 1 | Methyltransf_26 | 167 | 302 | 5.0e-07 | 29.7 | 1.2e-09 | 1.2e-06 | 28.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_164.1_13710.t1 | gi|260783662|ref|XP_002586892.1| | hypothetical protein BRAFLDRAFT_116066 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_164.1_13710.t1 | gi|556979474|ref|XP_005996615.1| | PREDICTED: putative methyltransferase NSUN6 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_164.1_13710.t1 | gi|617411937|ref|XP_007555713.1| | PREDICTED: putative methyltransferase NSUN6 isoform X2 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_164.1_13710.t1 | gi|617411930|ref|XP_007555711.1| | PREDICTED: putative methyltransferase NSUN6 isoform X1 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_164.1_13710.t1 | gi|699609480|ref|XP_009873049.1| | PREDICTED: putative methyltransferase NSUN6 [Apaloderma vittatum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_164.1_13710.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13710.t1 atgtatgaagacaggaagagaaagccacctgtgatgtaccaacatcctgtgttagaggagggtcaagaagaagtgttgat tattgagaacagaggcccaaatactgagtgtcaaaagagtgaaaaagaagtgattgtagatttatcatgcggcatgtcgg tgttacgtggtgctgatgtcttcgtgcagggaatcatgggagcaccaccaaacatgctcgccggtgaccatgtttctgtg tatgcagatttagacggtaaatgcctgaagggatcaaataaagtctacactggaaataagacatatgttggtaatggagt cgctcaacgtagtcgtgctgaaatcttcaaaactgaaaatcctttaagtggtgtaggagttcttatgactgagcctttat atgaagcccccagcctcagtgacttgtccccccacattacatatccccagaacttcccctcggcggtatgtgtgacggtg ttagacccccaaccaggggaggtcatcctggatatgtgtgcggctcctggagggaagacaactcatatagcaactaacat gaaggataagggacgggttgtagctatagacaagacagaacagaagataagcagagtgaaaagaaatgctgacaattgga atcttacctgtatagagtgctatgccttcgattcaacaaaatcctgtgatgtcaattctgattgtaataatgggccaccc tatccaccagagacgtttgataggatactattggacgcaccctgtagtgctttgggtcagaggccttcactcaaaaaccc catgtccctgaagacactaaagtcacaccctgtatgtcagagaaagctgctggaaaaggcagtagatctattgaagcctg gtggagtattagtgtacagtacatgtaccataacactggaagagaacgaggaacaagtagcatgggccatcaataaattc ccgtgcttgactctagatgaacagattccatttctaggagaggttggcagacagtgtgaaggtttatcagatgacgaggt gtcccagctacagtactttaaccctgtgttgtccaccacagacgtactcccggacgtacatagtgataccataggcttct ttatagcaaaatttaggaaaaagtacaaataa |
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Protein
| Protein ID | pfu_aug2.0_164.1_13710.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13710.t1 MYEDRKRKPPVMYQHPVLEEGQEEVLIIENRGPNTECQKSEKEVIVDLSCGMSVLRGADVFVQGIMGAPPNMLAGDHVSV YADLDGKCLKGSNKVYTGNKTYVGNGVAQRSRAEIFKTENPLSGVGVLMTEPLYEAPSLSDLSPHITYPQNFPSAVCVTV LDPQPGEVILDMCAAPGGKTTHIATNMKDKGRVVAIDKTEQKISRVKRNADNWNLTCIECYAFDSTKSCDVNSDCNNGPP YPPETFDRILLDAPCSALGQRPSLKNPMSLKTLKSHPVCQRKLLEKAVDLLKPGGVLVYSTCTITLEENEEQVAWAINKF PCLTLDEQIPFLGEVGRQCEGLSDDEVSQLQYFNPVLSTTDVLPDVHSDTIGFFIAKFRKKYK |
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