Gene
| Gene Model ID | pfu_aug2.0_164.1_13711 |
|---|---|
| Locus | scaffold164.1 : 101106 ... 104313 : + |
| To GenomeBrowser | scaffold164.1:101106..104313 |
| Genes list of scaffold | scaffold164.1 |
| Synonym | pfu_aug1.0_6781.1_67546 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_164.1_13711.t1 | 1 | 1 | zf-C3HC4_3 | 22 | 65 | 1.1e-06 | 28.1 | 8.2e-10 | 1.1e-06 | 28.1 |
| pfu_aug2.0_164.1_13711.t1 | 1 | 1 | zf-RING_2 | 23 | 61 | 3.7e-08 | 33.0 | 2.7e-11 | 3.7e-08 | 33.0 |
| pfu_aug2.0_164.1_13711.t1 | 2 | 1 | zf-C3HC4 | 24 | 61 | 6.5e-06 | 25.7 | 4.8e-09 | 6.5e-06 | 25.7 |
| pfu_aug2.0_164.1_13711.t1 | 1 | 1 | zf-C3HC4_2 | 24 | 61 | 6.6e-06 | 26.0 | 4.9e-09 | 6.6e-06 | 26.0 |
| pfu_aug2.0_164.1_13711.t1 | 2 | 2 | zf-C3HC4 | 280 | 285 | 6.5e-06 | 25.7 | 5.1 | 6900.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_164.1_13711.t1 | gi|585646007|ref|XP_006811660.1| | PREDICTED: tripartite motif-containing protein 12A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_164.1_13711.t1 | gi|390353807|ref|XP_003728193.1| | PREDICTED: uncharacterized protein LOC100893922 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_164.1_13711.t1 | gi|524881598|ref|XP_005097449.1| | PREDICTED: uncharacterized protein LOC101855943 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_164.1_13711.t1 | gi|524881600|ref|XP_005097450.1| | PREDICTED: uncharacterized protein LOC101855943 isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_164.1_13711.t1 | gi|676463811|ref|XP_009056717.1| | hypothetical protein LOTGIDRAFT_233027 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_164.1_13711.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13711.t1 atggacaagatggagtgtgatgaattaccacttaatgttccgttgaagtgtttcctggattacttcacgtgttcaatatg tatgacagagctcacgtgtacagtgacaaccgtttgtggacacaggtactgtgagaaatgtataaaagaatgggtagaca gaagtcatagctgcccgtgctgtaataaggaactgtctctgacacagcttttcagggattgtcagtttgattcactcatt agctctgtaaacgctgagaaagagaaagcagaaactatgtatttcagttctctcatagactcggcttctgatgccagtga aaaggaaatgtcccagtcctcagtggtggaaatggttcttaaaaagcatcttaagaatagttttgctgctcatgaacagt acatgcgtgaagttggggaccagtttcagcaaacttttagtaaacttgagacagaaactcaacaggccatagcagatctc ccctctcatggtctgtcccaagatgaaattgagcaacaaaaggaggacttacaacatacactttctagacgcagagattc actgcaaaaagaactggatacgtgcaagcaacttgtcgctgatgcgtatgacaggtacttaaaggaaaatatgccacagt ttagtgtcttaccggtgagagtttccattaatcttcttgacaaaggcgatataattcctaacattgttctaaaaccggca gaaactgtaggagaaaaaattcagaaagctgttgaggaggtaatgaaagccaaaaataacccagtgataaagtggcctga tgaggtgcgcctcttcatgtttggaccttttgcaaagtgcagcccgtgtgaagtcaaacaaattatctccaacattttaa atgatggcactgcatacccggaggtttacgcgttgaaccatgattctcgaccaattcttgagttcaacatgaagcccaac agtgagatagttatctacggacagatagtatgtgaaagcgatatgccaaagcagtgctttatcaacacgttcaagaaggg cggggaacagaaagtagattatttcttttgtaagcaatgctcgttcaaatggatatgccgctgctgcatggagatttgtc acaaagaccatcagattataccatatattatgaatcaccaaccagagtgggcctgctgctactgtcctaggaagaaaact tgtattttgaattag |
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Protein
| Protein ID | pfu_aug2.0_164.1_13711.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13711.t1 MDKMECDELPLNVPLKCFLDYFTCSICMTELTCTVTTVCGHRYCEKCIKEWVDRSHSCPCCNKELSLTQLFRDCQFDSLI SSVNAEKEKAETMYFSSLIDSASDASEKEMSQSSVVEMVLKKHLKNSFAAHEQYMREVGDQFQQTFSKLETETQQAIADL PSHGLSQDEIEQQKEDLQHTLSRRRDSLQKELDTCKQLVADAYDRYLKENMPQFSVLPVRVSINLLDKGDIIPNIVLKPA ETVGEKIQKAVEEVMKAKNNPVIKWPDEVRLFMFGPFAKCSPCEVKQIISNILNDGTAYPEVYALNHDSRPILEFNMKPN SEIVIYGQIVCESDMPKQCFINTFKKGGEQKVDYFFCKQCSFKWICRCCMEICHKDHQIIPYIMNHQPEWACCYCPRKKT CILN |
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