Gene
| Gene Model ID | pfu_aug2.0_164.1_13717 |
|---|---|
| Locus | scaffold164.1 : 329203 ... 341923 : + |
| To GenomeBrowser | scaffold164.1:329203..341923 |
| Genes list of scaffold | scaffold164.1 |
| Synonym | pfu_aug1.0_53923.1_20166 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tissue-type plasminogen activator | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_164.1_13717.t1 | 1 | 1 | Trypsin | 143 | 327 | 4.3e-34 | 118.0 | 4.7e-38 | 6.9e-34 | 117.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_164.1_13717.t1 | gi|156398379|ref|XP_001638166.1| | predicted protein [Nematostella vectensis] | 6.0e-26 |
| pfu_aug2.0_164.1_13717.t1 | gi|697503478|ref|XP_009680377.1| | PREDICTED: tissue-type plasminogen activator [Struthio camelus australis] | 8.0e-26 |
| pfu_aug2.0_164.1_13717.t1 | gi|695141584|ref|XP_009513318.1| | PREDICTED: tissue-type plasminogen activator [Phalacrocorax carbo] | 9.0e-26 |
| pfu_aug2.0_164.1_13717.t1 | gi|684378849|ref|XP_009166138.1| | hypothetical protein T265_03405 [Opisthorchis viverrini] | 1.0e-25 |
| pfu_aug2.0_164.1_13717.t1 | gi|543284372|ref|XP_005429291.1| | PREDICTED: tissue-type plasminogen activator [Geospiza fortis] | 1.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_164.1_13717.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13717.t1 atgcaaaacacaaaagacgagcatactatgagaccggaaagagacatacgacatataaacatcaaatacaaaagactact cataaaccaacgagaccaatgggcaaccggtgccgagtttggacggccatttgccattcaagtagcaaatggtgtggtta ttctggattacgtgcgcacaaccctcttacttctccaattacccagaggattcgaagaacgtacaattgtggtatttgct catatcgagaataaggaggaatcctcatgtctcagatttggaaaaaaatcagaaaccgaaggcatacagaatcaggataa aacaggaaccaaagcaaacaaacaaaaacctccaccatatgaaaagaagcgaactcccgatatgggagtgagaccaggtg cccaggaagaaaatagattcagagcaaacgaaataatagtcagagtaggggaatatgaccaagcagtgccagagagaact gaacgggaatatcctgtaaggaacattatcatccctccttcgtttaatacggtttcatatgtaaatgacatcgcactgct tcatatccagccaggaatacaattagcaaggggaattattgatacggcggatttaccttcaataaatacatggataacgc cgaatgatagatgctttgtttctggatggggtgaaacagaacaaggtccaacaactgtcgtgagggaagctcagttacag gttcttgatcaagtaggacagcaaagatgcagtaatctctaccgtcaacaaagagcgataactcgttctatgttttgtgc tggcagtaattcaggccttgcagttgacacatgtcttggggatagtggcggaccatttatatgcattaaaaatgggcgga gggtgttagtaggaataacatcatggggagtgatgcaatgtgggcgtaacgctatgtatcctggtgtttacacagacgtt agagctttacgacaatggattcgaaataatgccggattatag |
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Protein
| Protein ID | pfu_aug2.0_164.1_13717.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_164.1_13717.t1 MQNTKDEHTMRPERDIRHINIKYKRLLINQRDQWATGAEFGRPFAIQVANGVVILDYVRTTLLLLQLPRGFEERTIVVFA HIENKEESSCLRFGKKSETEGIQNQDKTGTKANKQKPPPYEKKRTPDMGVRPGAQEENRFRANEIIVRVGEYDQAVPERT EREYPVRNIIIPPSFNTVSYVNDIALLHIQPGIQLARGIIDTADLPSINTWITPNDRCFVSGWGETEQGPTTVVREAQLQ VLDQVGQQRCSNLYRQQRAITRSMFCAGSNSGLAVDTCLGDSGGPFICIKNGRRVLVGITSWGVMQCGRNAMYPGVYTDV RALRQWIRNNAGL |
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