Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_164.1_13719
Locus scaffold164.1 : 357470 ... 368262 : -
To GenomeBrowser scaffold164.1:357470..368262
Genes list of scaffold scaffold164.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_164.1_13719.t1 1 1 Aldo_ket_red 16 267 0.0 193.9 0.0 0.0 193.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_164.1_13719.t1 gi|118777462|ref|XP_308086.3| AGAP011050-PA [Anopheles gambiae str. PEST] 0.0
pfu_aug2.0_164.1_13719.t1 gi|755885368|ref|XP_011294043.1| PREDICTED: aldose reductase-like [Musca domestica] 0.0

Transcript
Transcript IDpfu_aug2.0_164.1_13719.t1
Definition-
>pfu_aug2.0_164.1_13719.t1
atggaaacgactgtaaaactgaataatggacatgcgatgccaatagttggtttagggacatggcagagtccagatgagaa
agtgaatcaggcagttaaagtagctctggatgttggatatcgtcacatagacacagcatataattacaaaaatgaggggg
cgattggagaagcactggatgagtacatcaaggcggggaaagtcaaaagggaggaattatttatagttaccaagcttcca
ggaattcatatgaatccaaaacaagtacggcgatctatagagagcagtctgaaaagactacgaacagactatgttgatct
gtaccttcttcattcaccaatcggatttcaggcaatggaggatctggttgatgcaggattgacaaaatccattgggttat
caaacttcaactccgtccaagtagataaaatatgccaagttgcccggattcagcctgtaaccaaccaagttgaatgtcat
ctgtattttccaaacaccgagcttgctgatttctgtaggaaacgtaacgtcacattaacagcatatgctccaattggctc
acctggacgtcctccaaatccattacaagatgcgtctccaaatctaatggaggatccaacagtggtcaaggtggctgaga
aacacaataaaacgccagcacagattcttctacgggctttgatgcagaagggaatcattgtcattccaaaaagtattaca
ccagaaaggatcaaacaaaatctacaggtatttgactttgagataagcaaagatgaaatgagtcaactagacaatataaa
aaacaacgaacgtctgttcaaattcaattttgggcacggtcatccagaatttcctttttccctcccatactag

Protein
Protein IDpfu_aug2.0_164.1_13719.t1
Definition-
>pfu_aug2.0_164.1_13719.t1
METTVKLNNGHAMPIVGLGTWQSPDEKVNQAVKVALDVGYRHIDTAYNYKNEGAIGEALDEYIKAGKVKREELFIVTKLP
GIHMNPKQVRRSIESSLKRLRTDYVDLYLLHSPIGFQAMEDLVDAGLTKSIGLSNFNSVQVDKICQVARIQPVTNQVECH
LYFPNTELADFCRKRNVTLTAYAPIGSPGRPPNPLQDASPNLMEDPTVVKVAEKHNKTPAQILLRALMQKGIIVIPKSIT
PERIKQNLQVFDFEISKDEMSQLDNIKNNERLFKFNFGHGHPEFPFSLPY

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495