Gene
| Gene Model ID | pfu_aug2.0_165.1_17042 |
|---|---|
| Locus | scaffold165.1 : 126314 ... 158425 : - |
| To GenomeBrowser | scaffold165.1:126314..158425 |
| Genes list of scaffold | scaffold165.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 12 member 4 isoform x4 | GO:0006821 GO:0015377 GO:0016020 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_165.1_17042.t1 | 2 | 1 | AA_permease | 106 | 258 | 0.0 | 182.4 | 6.1e-17 | 3.0e-13 | 48.9 |
| pfu_aug2.0_165.1_17042.t1 | 2 | 1 | AA_permease_2 | 122 | 241 | 3.9e-18 | 65.2 | 0.00081 | 4.0 | 5.8 |
| pfu_aug2.0_165.1_17042.t1 | 2 | 2 | AA_permease_2 | 406 | 629 | 3.9e-18 | 65.2 | 7.8e-22 | 3.9e-18 | 65.2 |
| pfu_aug2.0_165.1_17042.t1 | 2 | 2 | AA_permease | 410 | 684 | 0.0 | 182.4 | 1.82169e-44 | 9.10003e-41 | 139.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_165.1_17042.t1 | gi|642911198|ref|XP_008199568.1| | PREDICTED: solute carrier family 12 member 4 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_165.1_17042.t1 | gi|642911196|ref|XP_008199563.1| | PREDICTED: solute carrier family 12 member 4 isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_165.1_17042.t1 | gi|749750268|ref|XP_011137385.1| | PREDICTED: solute carrier family 12 member 7 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_165.1_17042.t1 | gi|752884910|ref|XP_011260217.1| | PREDICTED: solute carrier family 12 member 6 isoform X2 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_165.1_17042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_165.1_17042.t1 atggcccagacttcaaacggccccactgagggtgatatggttccgttacgggaactttctggtgcaggggcggatccagg agaaagatcagctctattgatgacagaaccaggggaagggaaggtggtggtgaaggaccgtacattccaggtggtaccag ctatagttataggtcacgaggtggactcgactccacaacgctcagatgatgacctgcatgaaagagggaaaatatctcaa atcatcaaccgcattgctaattaccaaggtggtgtggaaccaaacatagaacagacaaaagaccagccaaaacagaccat gttgacagctatatctatgagtgctatagccactaatggagtggtgcctgcaggagggtcgtactttatgatatcacgtt ccctgggaccggagtttggaggtgcggtaggcatactgttctacctgggtacctccgtagcctcctccatgtatattatt ggtgcagtggaaattctagtgaaatacatggcacgtagtatgtctatatttggagatgttgacattgaggccaatgcctt taacgcctatagagtgtatggtacagccgtacttattatactctctattatagtgtttataggcgtcaaatttgttagca agtttgcagcgctttctcttgcttgtgttattctctccatattctgtatatacattgggatttttgtatcaaatgaggat aacagcttacagatttgtctgttaggtgatcgtcttctaacgtcacaggtgtcaaacactaacggtacatttatgtgtat catgaatgaaacagcaaacatttttaagagctactgtacaatgggtcctaatgacacacataaatgtgagccgtattttg actcccacactactagagttctaccaggaattccagggttagccagtggagtattttatggtgatcgtcttctaacgtca caggtgtcaaacactaacggtacatttatgtgtatcatgaatgaaacagcaaacatttttaagagctactgtacaatggg tcctaatgacacacataaatgtgagccgtattttgactcccacactactagagttctaccaggaattccagggttagcca gtggagtattttatgagaatttgaacaacagatacaccaggcagaataagatcattggttatgatatagacggagaccgg tcacagggagagattatagctgatgttactagctcctttatggtcctactggccatttacttcccatcatgcactggtat aatggctggctctaacagatcaggtgaccttgccgacgcctccaagtccatccctgtaggaaccattgctgccatagcaa ccacatcttttgtttatatcactagtgttcttttctttgctgggactgtcaatggggacttactacgagacaagtttgga gagagtatagatgctggattggtggtagctaagctagcatggccaaatgaatgggtgattctgattggttcattcctgtc tacactaggggctggcctacaaagcttgacaggagcaccacggctcttacaggctatttccagtgatggtgtcattccat tccttaatgtattcagcgtaacaacaaagcgtggagagccattccgagctcttctccttacggcattgatatcagagatc ggcattcttatagccagcttagattctgtagctcctatcattacaatgttctttttaatgtgttatggatttgtgaacat ggcgtgtgccttacagacattattgaggactcccagctggaggcctaggttcagattctatcactggacgttatcactgg ttggtttagcgttgtgtataacactgatgtttatatccagctggtactacgcactcggagcaatagccttggctttctgt atctacaaatatatagaatacaaaggagctgagaaggagtggggagatggtataagaggtttggctatgtcagcagctag atatgctttactgaggctccaacaaggaccacctcataccaaaaactggaggtag |
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Protein
| Protein ID | pfu_aug2.0_165.1_17042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_165.1_17042.t1 MAQTSNGPTEGDMVPLRELSGAGADPGERSALLMTEPGEGKVVVKDRTFQVVPAIVIGHEVDSTPQRSDDDLHERGKISQ IINRIANYQGGVEPNIEQTKDQPKQTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGILFYLGTSVASSMYII GAVEILVKYMARSMSIFGDVDIEANAFNAYRVYGTAVLIILSIIVFIGVKFVSKFAALSLACVILSIFCIYIGIFVSNED NSLQICLLGDRLLTSQVSNTNGTFMCIMNETANIFKSYCTMGPNDTHKCEPYFDSHTTRVLPGIPGLASGVFYGDRLLTS QVSNTNGTFMCIMNETANIFKSYCTMGPNDTHKCEPYFDSHTTRVLPGIPGLASGVFYENLNNRYTRQNKIIGYDIDGDR SQGEIIADVTSSFMVLLAIYFPSCTGIMAGSNRSGDLADASKSIPVGTIAAIATTSFVYITSVLFFAGTVNGDLLRDKFG ESIDAGLVVAKLAWPNEWVILIGSFLSTLGAGLQSLTGAPRLLQAISSDGVIPFLNVFSVTTKRGEPFRALLLTALISEI GILIASLDSVAPIITMFFLMCYGFVNMACALQTLLRTPSWRPRFRFYHWTLSLVGLALCITLMFISSWYYALGAIALAFC IYKYIEYKGAEKEWGDGIRGLAMSAARYALLRLQQGPPHTKNWR |
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