Gene
| Gene Model ID | pfu_aug2.0_1650.1_01747 |
|---|---|
| Locus | scaffold1650.1 : 50216 ... 74345 : + |
| To GenomeBrowser | scaffold1650.1:50216..74345 |
| Genes list of scaffold | scaffold1650.1 |
| Synonym | pfu_aug1.0_6906.1_17009 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| angiopoietin-2 isoform x3 | GO:0044699 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1650.1_01747.t1 | 1 | 1 | Fibrinogen_C | 37 | 218 | 1.4013e-44 | 152.5 | 0.0 | 1.68156e-44 | 152.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1650.1_01747.t1 | gi|260784638|ref|XP_002587372.1| | hypothetical protein BRAFLDRAFT_231428 [Branchiostoma floridae] | 3.00018e-42 |
| pfu_aug2.0_1650.1_01747.t1 | gi|410927019|ref|XP_003976965.1| | 6.00036e-42 | |
| pfu_aug2.0_1650.1_01747.t1 | gi|602662587|ref|XP_007436937.1| | PREDICTED: angiopoietin-4 [Python bivittatus] | 9.99967e-42 |
| pfu_aug2.0_1650.1_01747.t1 | gi|632969057|ref|XP_007900879.1| | PREDICTED: angiopoietin-1 [Callorhinchus milii] | 2.0e-40 |
| pfu_aug2.0_1650.1_01747.t1 | gi|260788748|ref|XP_002589411.1| | hypothetical protein BRAFLDRAFT_77854 [Branchiostoma floridae] | 3.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_1650.1_01747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1650.1_01747.t1 atgatgtggttatccggattacgtgcgcacagtcctcccacacttccacttgtacagaggtcacgaagaacgcagaagtg ctgtgtaaagtatcctcctcactggattcatgattgttccgatttgaggtctattggctacaaaacgagtggagtgtaca atataattgtgaagagggaggtgatggaggcatactgtgacatggagacagaaggcgggggatggacagttgtaatgaaa cgggtcgatggatctctcaacttcaatcagaattggaataagtacaagtatggatttggcagtgccaggggcgaatattg gttgggcaatgagtacttacatacattgacgtggggaagaaactacggagtgtacttcaagttacagacctggaagaaaa agtggtactgggcctggtatccccgatttttcctttatcccgagaataagggatacatgatttacttaatgggatacaaa ggaaatgctggacagaggctatacctttctaactcaggcggttctatacaagaccagcgcttttcaacacgtgacagaga tcaggatgatgcctcgggtaatcaagcctttaattatggaggtggatggtggtacaatcgctgggcatactgtgcactga caggcacatatggttccaataagttcgtgtgggatggtatagggaagctgagagcgtcaaccattatggtccgaccaagg cagtga |
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Protein
| Protein ID | pfu_aug2.0_1650.1_01747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1650.1_01747.t1 MMWLSGLRAHSPPTLPLVQRSRRTQKCCVKYPPHWIHDCSDLRSIGYKTSGVYNIIVKREVMEAYCDMETEGGGWTVVMK RVDGSLNFNQNWNKYKYGFGSARGEYWLGNEYLHTLTWGRNYGVYFKLQTWKKKWYWAWYPRFFLYPENKGYMIYLMGYK GNAGQRLYLSNSGGSIQDQRFSTRDRDQDDASGNQAFNYGGGWWYNRWAYCALTGTYGSNKFVWDGIGKLRASTIMVRPR Q |
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