Gene
| Gene Model ID | pfu_aug2.0_1653.1_11788 |
|---|---|
| Locus | scaffold1653.1 : 10674 ... 44155 : - |
| To GenomeBrowser | scaffold1653.1:10674..44155 |
| Genes list of scaffold | scaffold1653.1 |
| Synonym | pfu_aug1.0_14511.1_54067 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1653.1_11788.t1 | 8 | 1 | SH3_2 | 12 | 64 | 0.0 | 202.9 | 1.5e-12 | 2.7e-09 | 36.3 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 1 | SH3_1 | 14 | 59 | 0.0 | 236.6 | 2.3e-13 | 4.2e-10 | 38.8 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 1 | SH3_9 | 15 | 63 | 0.0 | 249.5 | 3.6e-14 | 6.7e-11 | 41.5 |
| pfu_aug2.0_1653.1_11788.t1 | 5 | 1 | SH3_3 | 29 | 46 | 1.5e-13 | 50.7 | 3.2 | 5900.0 | -2.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 2 | SH3_9 | 79 | 122 | 0.0 | 249.5 | 2.9e-08 | 5.4e-05 | 22.6 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 2 | SH3_1 | 79 | 122 | 0.0 | 236.6 | 5.4e-11 | 1.0e-07 | 31.2 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 2 | SH3_2 | 79 | 128 | 0.0 | 202.9 | 1.8e-05 | 0.034 | 13.6 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 3 | SH3_2 | 150 | 200 | 0.0 | 202.9 | 4.5e-10 | 8.4e-07 | 28.3 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 3 | SH3_9 | 152 | 200 | 0.0 | 249.5 | 2.2e-10 | 4.2e-07 | 29.4 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 3 | SH3_1 | 152 | 194 | 0.0 | 236.6 | 2.8e-10 | 5.2e-07 | 28.9 |
| pfu_aug2.0_1653.1_11788.t1 | 5 | 2 | SH3_3 | 169 | 183 | 1.5e-13 | 50.7 | 6.5 | 12000.0 | -3.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 4 | SH3_2 | 331 | 383 | 0.0 | 202.9 | 1.2e-10 | 2.2e-07 | 30.2 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 4 | SH3_1 | 333 | 378 | 0.0 | 236.6 | 1.1e-12 | 2.0e-09 | 36.6 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 4 | SH3_9 | 334 | 381 | 0.0 | 249.5 | 1.0e-13 | 1.9e-10 | 40.1 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 5 | SH3_2 | 437 | 487 | 0.0 | 202.9 | 2.7e-08 | 5.0e-05 | 22.7 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 5 | SH3_1 | 439 | 482 | 0.0 | 236.6 | 1.1e-09 | 2.1e-06 | 27.0 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 5 | SH3_9 | 447 | 487 | 0.0 | 249.5 | 2.4e-09 | 4.5e-06 | 26.1 |
| pfu_aug2.0_1653.1_11788.t1 | 5 | 3 | SH3_3 | 452 | 486 | 1.5e-13 | 50.7 | 0.0001 | 0.19 | 11.9 |
| pfu_aug2.0_1653.1_11788.t1 | 3 | 1 | BAR | 834 | 878 | 3.2e-29 | 102.0 | 8.0 | 15000.0 | -5.9 |
| pfu_aug2.0_1653.1_11788.t1 | 2 | 1 | RhoGEF | 866 | 1045 | 5.40004e-41 | 140.4 | 6.44597e-44 | 1.2e-40 | 139.3 |
| pfu_aug2.0_1653.1_11788.t1 | 3 | 2 | BAR | 929 | 998 | 3.2e-29 | 102.0 | 1.5 | 2700.0 | -2.4 |
| pfu_aug2.0_1653.1_11788.t1 | 3 | 3 | BAR | 1104 | 1293 | 3.2e-29 | 102.0 | 1.7e-32 | 3.2e-29 | 102.0 |
| pfu_aug2.0_1653.1_11788.t1 | 2 | 2 | RhoGEF | 1134 | 1194 | 5.40004e-41 | 140.4 | 0.16 | 290.0 | 1.1 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 6 | SH3_2 | 1436 | 1490 | 0.0 | 202.9 | 1.0e-06 | 0.0019 | 17.6 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 6 | SH3_1 | 1442 | 1486 | 0.0 | 236.6 | 0.00021 | 0.39 | 10.1 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 6 | SH3_9 | 1449 | 1488 | 0.0 | 249.5 | 0.00019 | 0.36 | 10.4 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 7 | SH3_9 | 1604 | 1656 | 0.0 | 249.5 | 2.7e-12 | 5.0e-09 | 35.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 7 | SH3_1 | 1604 | 1652 | 0.0 | 236.6 | 2.1e-11 | 3.9e-08 | 32.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 7 | SH3_2 | 1608 | 1657 | 0.0 | 202.9 | 6.9e-08 | 0.00013 | 21.4 |
| pfu_aug2.0_1653.1_11788.t1 | 5 | 4 | SH3_3 | 1618 | 1656 | 1.5e-13 | 50.7 | 4.4e-07 | 0.00082 | 19.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 8 | SH3_9 | 1784 | 1836 | 0.0 | 249.5 | 2.7e-12 | 5.0e-09 | 35.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 8 | SH3_1 | 1784 | 1832 | 0.0 | 236.6 | 2.1e-11 | 3.9e-08 | 32.5 |
| pfu_aug2.0_1653.1_11788.t1 | 8 | 8 | SH3_2 | 1788 | 1837 | 0.0 | 202.9 | 6.9e-08 | 0.00013 | 21.4 |
| pfu_aug2.0_1653.1_11788.t1 | 5 | 5 | SH3_3 | 1798 | 1836 | 1.5e-13 | 50.7 | 4.4e-07 | 0.00082 | 19.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1653.1_11788.t1 | gi|524880127|ref|XP_005096731.1| | PREDICTED: dynamin-binding protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1653.1_11788.t1 | gi|676481210|ref|XP_009062301.1| | hypothetical protein LOTGIDRAFT_71852, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1653.1_11788.t1 | gi|512852033|ref|XP_004915929.1| | PREDICTED: dynamin-binding protein isoform X2 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_1653.1_11788.t1 | gi|573886083|ref|XP_006630899.1| | PREDICTED: dynamin-binding protein-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_1653.1_11788.t1 | gi|512852025|ref|XP_004915928.1| | PREDICTED: dynamin-binding protein isoform X1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1653.1_11788.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1653.1_11788.t1 atgaagcaagaggttaaagagtatgtgaatcagtatgtgagagccgtgtatgactttgatacaaatcaccctaaggagat caatctacaaaaaggggacataattagagtgacgtcagcagtggacaacaattggctgtgtggtcagttgaggggtcaag agggaaactttccatccagcttcatagaaaaacttaccctacctgcagtacaggaaaatcaaaagatatatggtgctata gaaaactttcctgctctgcaaccaggggatttagaattcagaaaaggtgcaataattataggtttacaatctgtggatga aaactggtggtcaggacagattggatctaaagaaggcattttcccattaactcatgtgatcgaattagaaataccggcaa gtcttcgtgatcgtagtaaaagctgccattctgctgaaccactctttgctcaagccctttgtgattcagtagctcaactt gatgaggaacttagcttcagtacaggggacataatcacagtgacagaagtgatcgattccgactggtattatggggaact cggtagtaagaagggtatgttcctctcgtcttgtgtgcaattactacaagatgatgattctgcccctggttcccaacagg gtagcttcaagaaggaatctagtgttagtcagaacaaaactcggaatgaaaagtcaaattcacagtatttacaaaaatct tactcttttgatcaatcgtactacggaagtttaagttccgatcacaaggtaccgcctgatcctgtggcacatgtagagga ttccgtattcaacaaaccatactcagatagtgctggtcactcgttagattctccacagaacagtgaatcatatgatagcg gcattagtgttaataccaatcatatcgcagggtactcagatcagtcatccgcagacaatgcagcatacactagtgagaac accaagagtgtggaatctagtgttaatccgtatggtgtcgctcagtttccgtttgctggacaatcggtcgatgagcttac atttgaggccaatgagattatttatttgattcaacatattgatgaacagtggacagagggtgaaattgatggaaaaatag gaatttttcccacatcttttgtgtcgattattgttgactgtccatatgcttattctgaacagggggaaaatgaggaagac atttcagcttctagaaaacaggaagaagagggcagatctgaaaaatgtcaaattgacttgaattcgcaaactgtcccgcc ttgtgcttcaggaaaagaggaatatgcattagttttgcacaaatttcttggggaagtagagggagatcttcatgtagagc agggtgatactgtgaccgttatagagagagttgatgaaaactggattaaagcaaagaatgaggctggggaaattggactc tgcccaaaacaatttgtagagtttcttagtgatagtccctccagtattaaatctttacctgaaaattctgttgaagggga agaagtgcatagaaatgtaccagagacacaaaatgttgaacaaacccatactcctgtgattgataatagtgccaagacca aagaaactcctatagtttatacaccaaagtctagtttacctagtacagtgaaattaaaacctcagctgggacctaagcct acactgaaaccaaagcccaagttactaccaaagccaggaattggaagaacaaatcaaatgtctaaagccaaagctgattc attacaaagacctgttagtgcttttgagccgacaccaaatactgaggatatatcccctcttccattacgccaagtatcaa gtattgcaaatacccctaagagacacagtgtaaacttcccaatgtctgattctgtcaaacatgaaagacctacgattaat acaccttatagttctaccaaatcagctagtaaaaccaagactgagtactctgttggcatgtccactttctttgttgaacc tgacgaggtgaaaaaagtgccgcccatgaggaagcctccacccattccccagagaagttttgagacagaacatttgtttg atcgcaagccatctttacggaaaccccctcctcccagaccaacggggccaagaatagcccctgcaccgtctaaggaaccc ttgatgccagagaaagtagagcctgtaagaaaggtaccacagcgaccagctccggctcgacctgtagagaaggcaccaaa cagaccacaggatgtgatgagaccaccaaaaagaccaccaccaagggcaccagctgtcaaggagcatggtgataacctga tgagatttagccctgagaaagatgacaatactactgatgaagctaatgaagaggttatagccgacctgaggaggaggatc caagaaactgagacggatctagagttgtggatactgcttacagaaaacttagagaggctttgtcctgaggagagagatct gcaggctaaaaagagactggaggaggaaaggagggctgaggaagaaaaaaggaaggaagaagaaaggaagatgtcagctg aaatgaaggcaaagagacacgaaaagagagaaaaagtgatagaggaattaatgcagacagaaaaagactttctacaaggt ttaagcctctgtatggaagtattcatagatccaggggctgaaaagcatccagaagttgacactgatctgttgctaggcaa catggaggacatagcagacgtatcacagagattgttgacccaattagaggcagccattcagggcaaagaatttgaccaac aagtaataggtacgtgttttatgacactagcagatgacatgaagaatgcatatgctccatactgtcgtaaccatgacagt gttataactcttattgaaaagtacaaagaagagccaagtatcagtgccttccttcagagtcagttggataagttacgtga gaaatgtgtagtgtttgacttagaggccatcctaataaaacctgtacaaaggattctgaagtacccacttctccttaatg aacttttcaagtctactgaggatgaccatccagacaagcctgagatactggctggaatcaatgctatgacagatgtagct acggcaattaatgagtataagcgacgtaaagatcttgacaagcctgagatactggctggaatcaatgctatgacagatgt agctacggcaattaatgagtataagcgacgtaaagatcttgtatacaagtataaaaaagagacagatgcatcttttggtg acaaacttgccaaacttagcttccataccatcaagaaaaaaggcagtagattcaaaggaagacttacaactaatttagga tttagtcctcagactcgagatgagaattttgagaatgaagagacaagattcagacagcttgagaaaatagtgaagatatt tgtacgagatgtccagacatttactacacagattcaggattctgtgagttaccatgagaaccttgtagcagatataattg atttttacgatgacaaacaacaaagtcccacagtacagcagtttcagcaggcacaacagaaaattgataacacattccta cctgaatttcttgagaatgtcagtgttcttgttgtctcccctttgaccaagctgacacagatgtttgatggacccaccaa agtaatccagaaacgatatgataaactgttagattacgacaacttgctgagaaaaggaaaagatgaaaaggctacagaga agtcattaagtaaggccaagcaagattacgaagccttaaacgcccagttactggacgagcttcccaaattatacagccta tcactgagcctattacaggactgtgtcacgtcgttcctaccatcattgttaacccacggagagaacgtagtggagacgtt taacattcagcacgtagcgatggtggatcgtctgtctgtgttaagctttataccaaagggattcaatcctaaagttgatg ctgctgttaagtcaggagataaaaaaccgtcaaaaagacagtcactgatcaacactctaccatcattgttaacccacgga gagaacgtagtggagacgtttaacattcagcacgtagcgatggtggatcgtctgtctgtgttaagctttataccaaaagg cttcaatcctaaagttgatgctgctgttaagtcaggagataaaaaaccgtcaaaaagacagtcactgattaacactgata cccctaatccccagttagatagtcagagggtgtttttacgtcagaggtacagcccagatcagttatttcgagtcgcacaa acttatacagcaatagacatgatggacctatccctgcaggagggggatctagtgggcgtggtcatgaagaaagatcccat gggtaacagggagcggtggtttgtggataatgccactaccaaaggatttgtgccttcccacattttacaactcccaaact catctccacagcaatcccattctcaactttatccttcaatcagtcagccagatgtgccgtcttctcccattggtctttct ccacaaaactcaaatattacaccttctccgattggtcagtatgctagtgccacaagtagtccacaaaatactcatcagac gtcttctcccattggtcagacacaaaaatcaccaaagattgtccctcccattggtgaagatgaactgtcagaagaactag atgaaatgctcaatgaggatatgaccccagatatatcttctgattatagtcgtgattcctatataccagaatgtgaagag ttctattatgcagagtatgcatttgatgcacggaattccaatgaaatgacaatgtttgaaggacaagttgtgacagtgtt agccaagcatgacgaggagcagaacacagattggtggtatgttgatgcagacggacatcgaggctacgcaccagcggctt acctgaaaccaatgactaccaaaggatttgtgccttcccacattttacaactcccaaactcatctccacagcaatcccat tctcaactttatccttcaatcagtcagccagatgtgccatcttctcccatcggtgtttctccacaaaactcaaatgttac accttctccgattggtcagtattctagtgccacaagtagtccacaaaatactcatcagacatcttctcccattggtcaga cacaaaaatcaccaaagattgtccctcccattggtgaagatgaactgtcagaagaactagatgaaatgctcaatgaggat atgaccccagatatatcttctgattatagtcgtgattcctatataccagaatgtgaagagttctattatgcagagtatgc atttgatgcacggaattccaatgaaatgacaatgtttgaaggacaagttgtgacagtgttagccaagcatgacgaggagc agaacacagattggtggtatgttgatgcagacggacatcgaggctacgcaccagcggcttacctgaaaccaatgagttag |
|
Protein
| Protein ID | pfu_aug2.0_1653.1_11788.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1653.1_11788.t1 MKQEVKEYVNQYVRAVYDFDTNHPKEINLQKGDIIRVTSAVDNNWLCGQLRGQEGNFPSSFIEKLTLPAVQENQKIYGAI ENFPALQPGDLEFRKGAIIIGLQSVDENWWSGQIGSKEGIFPLTHVIELEIPASLRDRSKSCHSAEPLFAQALCDSVAQL DEELSFSTGDIITVTEVIDSDWYYGELGSKKGMFLSSCVQLLQDDDSAPGSQQGSFKKESSVSQNKTRNEKSNSQYLQKS YSFDQSYYGSLSSDHKVPPDPVAHVEDSVFNKPYSDSAGHSLDSPQNSESYDSGISVNTNHIAGYSDQSSADNAAYTSEN TKSVESSVNPYGVAQFPFAGQSVDELTFEANEIIYLIQHIDEQWTEGEIDGKIGIFPTSFVSIIVDCPYAYSEQGENEED ISASRKQEEEGRSEKCQIDLNSQTVPPCASGKEEYALVLHKFLGEVEGDLHVEQGDTVTVIERVDENWIKAKNEAGEIGL CPKQFVEFLSDSPSSIKSLPENSVEGEEVHRNVPETQNVEQTHTPVIDNSAKTKETPIVYTPKSSLPSTVKLKPQLGPKP TLKPKPKLLPKPGIGRTNQMSKAKADSLQRPVSAFEPTPNTEDISPLPLRQVSSIANTPKRHSVNFPMSDSVKHERPTIN TPYSSTKSASKTKTEYSVGMSTFFVEPDEVKKVPPMRKPPPIPQRSFETEHLFDRKPSLRKPPPPRPTGPRIAPAPSKEP LMPEKVEPVRKVPQRPAPARPVEKAPNRPQDVMRPPKRPPPRAPAVKEHGDNLMRFSPEKDDNTTDEANEEVIADLRRRI QETETDLELWILLTENLERLCPEERDLQAKKRLEEERRAEEEKRKEEERKMSAEMKAKRHEKREKVIEELMQTEKDFLQG LSLCMEVFIDPGAEKHPEVDTDLLLGNMEDIADVSQRLLTQLEAAIQGKEFDQQVIGTCFMTLADDMKNAYAPYCRNHDS VITLIEKYKEEPSISAFLQSQLDKLREKCVVFDLEAILIKPVQRILKYPLLLNELFKSTEDDHPDKPEILAGINAMTDVA TAINEYKRRKDLDKPEILAGINAMTDVATAINEYKRRKDLVYKYKKETDASFGDKLAKLSFHTIKKKGSRFKGRLTTNLG FSPQTRDENFENEETRFRQLEKIVKIFVRDVQTFTTQIQDSVSYHENLVADIIDFYDDKQQSPTVQQFQQAQQKIDNTFL PEFLENVSVLVVSPLTKLTQMFDGPTKVIQKRYDKLLDYDNLLRKGKDEKATEKSLSKAKQDYEALNAQLLDELPKLYSL SLSLLQDCVTSFLPSLLTHGENVVETFNIQHVAMVDRLSVLSFIPKGFNPKVDAAVKSGDKKPSKRQSLINTLPSLLTHG ENVVETFNIQHVAMVDRLSVLSFIPKGFNPKVDAAVKSGDKKPSKRQSLINTDTPNPQLDSQRVFLRQRYSPDQLFRVAQ TYTAIDMMDLSLQEGDLVGVVMKKDPMGNRERWFVDNATTKGFVPSHILQLPNSSPQQSHSQLYPSISQPDVPSSPIGLS PQNSNITPSPIGQYASATSSPQNTHQTSSPIGQTQKSPKIVPPIGEDELSEELDEMLNEDMTPDISSDYSRDSYIPECEE FYYAEYAFDARNSNEMTMFEGQVVTVLAKHDEEQNTDWWYVDADGHRGYAPAAYLKPMTTKGFVPSHILQLPNSSPQQSH SQLYPSISQPDVPSSPIGVSPQNSNVTPSPIGQYSSATSSPQNTHQTSSPIGQTQKSPKIVPPIGEDELSEELDEMLNED MTPDISSDYSRDSYIPECEEFYYAEYAFDARNSNEMTMFEGQVVTVLAKHDEEQNTDWWYVDADGHRGYAPAAYLKPMS |
|